A novel cuproptosis-related lncRNA signature predicts prognosis and therapeutic response in bladder cancer

被引:4
|
作者
Cai, Jinming [1 ,2 ]
Xie, Haoran [3 ]
Yan, Yilin [1 ]
Huang, Zhengnan [1 ]
Tang, Pengfei [4 ]
Cao, Xiangqian [1 ]
Wang, Zeyi [4 ]
Yang, Chenkai [1 ]
Wen, Jiling [2 ]
Tan, Mingyue [5 ]
Zhang, Fang [1 ]
Shen, Bing [1 ]
机构
[1] Shanghai Jiao Tong Univ, Shanghai Gen Hosp, Dept Urol, Sch Med, Shanghai, Peoples R China
[2] Tongji Univ, Shanghai East Hosp, Dept Urol, Sch Med, Shanghai, Peoples R China
[3] Shanghai Jiao Tong Univ, Shanghai Gen Hosp, Dept Gastroenterol, Sch Med, Shanghai, Peoples R China
[4] Nanjing Med Univ, Dept Urol, Shanghai Gen Hosp, Shanghai, Peoples R China
[5] Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Urol, Shanghai, Peoples R China
关键词
cuproptosis; bladder cancer; lncRNAs; immunotherapy; survival analysis; URINARY; PROLIFERATION; IMMUNOTHERAPY; REVEALS; ZN; SE; CU;
D O I
10.3389/fgene.2022.1082691
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Bladder cancer (BC) ranks the tenth in the incidence of global tumor epidemiology. LncRNAs and cuproptosis were discovered to regulate the cell death. Herein, we downloaded transcriptome profiling, mutational data, and clinical data on patients from The Cancer Genome Atlas (TCGA). High- and low-risk BC patients were categorized. Three CRLs (AL590428.1, AL138756.1 and GUSBP11) were taken into prognostic signature through least absolute shrinkage and selection operator (LASSO) Cox regression. Worse OS and PFS were shown in high-risk group (p < 0.05). ROC, independent prognostic analyses, nomogram and C-index were predicted via CRLs. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis indicated IncRNAs play a biological role in BC progression. Immune-related functions showed the high-risk group received more benefit from immunotherapy and had stronger immune responses, and the overall survival was better (p < 0.05). Finally, a more effective outcome (p < 0.05) was found from clinical immunotherapy via the TIDE algorithm and many potential anti-tumor drugs were identified. In our study, the cuproptosis-related signature provided a novel tool to predict the prognosis in BC patients accurately and provided a novel strategy for clinical immunotherapy and clinical applications.
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页数:14
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