Taxonomic considerations on Aerococcus urinae with proposal of subdivision into Aerococcus urinae, Aerococcus tenax sp. nov., Aerococcus mictus sp. nov., and Aerococcus loyolae sp. nov

被引:8
|
作者
Choi, Brian I. [1 ]
Ene, Adriana [2 ]
Du, Jingjie [1 ]
Johnson, Genevieve [2 ]
Putonti, Catherine [1 ,2 ,3 ]
Schouw, Christian H. [4 ]
Dargis, Rimtas [4 ]
Senneby, Erik [5 ]
Christensen, Jens J. [4 ,6 ]
Wolfe, Alan J. [1 ]
机构
[1] Loyola Univ, Dept Microbiol & Immunol, Maywood, IL 60153 USA
[2] Loyola Univ, Bioinformat Program, Chicago, IL USA
[3] Loyola Univ, Dept Biol, Chicago, IL USA
[4] Reg Dept Clin Microbiol, Slagelse, Region Zealand, Denmark
[5] Lund Univ, Dept Translat Med, Clin Microbiol, Lund, Sweden
[6] Univ Copenhagen, Dept Clin Med, Copenhagen, Denmark
关键词
Aerococcus loyolae; Aerococcus mictus; Aerococcus tenax; Aerococcus urinae; MALDI-TOF MS; whole genome sequencing; DESORPTION IONIZATION-TIME; FLIGHT MASS-SPECTROMETRY; PHYLOGENETIC ANALYSIS; IDENTIFICATION; SANGUINICOLA; ORGANISM;
D O I
10.1099/ijsem.0.006066
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Average nucleotide identity analysis, based on whole genome sequences of 115 strains previously identified as Aerococcus urinae, an emerging uropathogen, discriminates at least six unique genomic taxa. The whole genome analysis affords clearer species boundaries over 16S rRNA gene sequencing and traditional phenotypic approaches for the identification and phylogenetic organization of Aerococcus species. The newly described species can be differentiated by matrix- assisted laser desorption ionization time- of- flight analysis of protein signatures. We propose the emendation of the description of A. urinae (type strain ATCC 51268T = CCUG 34223T=NCFB 2893) and the names of Aerococcus tenax sp. nov. (ATCC TSD- 302T = DSM 115700T = CCUG 76531T=NR-58630T), Aerococcus mictus sp. nov. (ATCC TSD- 301T = DSM 115699T = CCUG 76532T=NR-58629T), and Aerococcus loyolae sp. nov. (ATCC TSD- 300T = DSM 115698T = CCUG 76533T=NR-58628T) for three of the newly identified genomic taxa.
引用
收藏
页数:11
相关论文
共 50 条
  • [41] Saccharopolyspora karakumensis sp. nov., Saccharopolyspora elongata sp. nov., Saccharopolyspora aridisoli sp. nov., Saccharopolyspora terrae sp. nov. and their biotechnological potential revealed by genome analysis
    Saygin, Hayrettin
    Ay, Hilal
    Guven, Kiymet
    Inan-Bektas, Kadriye
    Cetin, Demet
    Sahin, Nevzat
    SYSTEMATIC AND APPLIED MICROBIOLOGY, 2021, 44 (06)
  • [42] Fructobacillus papyriferae sp. nov., Fructobacillus papyrifericola sp. nov., Fructobacillus broussonetiae sp. nov. and Fructobacillus parabroussonetiae sp. nov., isolated from paper mulberry in Taiwan
    Lin, Shih-Ting
    Guu, Jia-Rong
    Wang, Hsing-Min
    Tamura, Tomohiko
    Mori, Koji
    Huang, Lina
    Watanabe, Koichi
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (02)
  • [43] Phylogenetic classification of ten novel species belonging to the genus Bifidobacterium comprising B. phasiani sp. nov., B. pongonis sp. nov., B. saguinibicoloris sp. nov., B. colobi sp. nov., B. simiiventris sp. nov., B. santillanense sp. nov., B. miconis sp. nov., B. amazonense sp. nov., B. pluvialisilvae sp. nov., and B. miconisargentati sp. nov
    Lugli, Gabriele Andrea
    Calvete-Torre, Ines
    Alessandri, Giulia
    Milani, Christian
    Turroni, Francesca
    Laiolo, Paola
    Ossiprandi, Maria Cristina
    Margolles, Abelardo
    Ruiz, Lorena
    Ventura, Marco
    SYSTEMATIC AND APPLIED MICROBIOLOGY, 2021, 44 (06)
  • [44] Five novel Hymenobacter species isolated from air: Hymenobacter cellulosilyticus sp. nov., Hymenobacter cellulosivorans sp. nov., Hymenobacter aerilatus sp. nov., Hymenobacter sublimis sp. nov. and Hymenobacter volaticus sp. nov.
    Kim, Yiseul
    Subramanian, Parthiban
    Choi, Hyorim
    Weon, Hang-Yeon
    Kim, Seunghwan
    Kwon, Soon-Wo
    Lee, Daseul
    Han, Byeong-Hak
    Hong, Seung-Beom
    Heo, Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (09)
  • [45] Duganella albus sp. nov., Duganella aquatilis sp. nov., Duganella pernnla sp. nov. and Duganella levis sp. nov., isolated from subtropical streams in China
    Lu, Huibin
    Deng, Tongchu
    Liu, Feifei
    Wang, Yonghong
    Yang, Xunan
    Xu, Meiying
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (06) : 3801 - 3808
  • [46] Xenorhabdus bharatensis sp. nov., Xenorhabdus entomophaga sp. nov., Xenorhabdus siamensis sp. nov., and Xenorhabdus thailandensis sp. nov. Isolated from Steinernema Entomopathogenic Nematodes
    Thanwisai, Aunchalee
    Machado, Ricardo A. R.
    Bhat, Aashaq Hussain
    Pidot, Sacha J.
    Tandhavanant, Sarunporn
    Subkrasae, Chanakan
    Meesil, Wipanee
    Ardpairin, Jiranun
    Pansri, Supawan
    Vitta, Apichat
    CURRENT MICROBIOLOGY, 2025, 82 (01)
  • [47] Dyella humicola sp. nov., Dyella subtropica sp. nov., Dyella silvatica sp. nov. and Dyella silvae sp. nov., isolated from subtropical forest soil
    Feng, Guang-Da
    Deng, Xiaoqin
    Li, Jiali
    Chen, Wendi
    Zhang, Xianjiao
    Zhu, Honghui
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (05)
  • [48] Reclassification of four subspecies in the genus Streptomyces to Streptomyces rubradiris sp. nov., Streptomyces asoensis sp. nov., Streptomyces fructofermentans sp. nov. and Streptomyces ossamyceticus sp. nov.
    Komaki, Hisayuki
    Tamura, Tomohiko
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (11)
  • [49] Additions to the genus Gimesia: description of Gimesia alba sp. nov., Gimesia algae sp. nov., Gimesia aquarii sp. nov., Gimesia aquatilis sp. nov., Gimesia fumaroli sp. nov. and Gimesia panareensis sp. nov., isolated from aquatic habitats of the Northern Hemisphere
    Sandra Wiegand
    Mareike Jogler
    Christian Boedeker
    Anja Heuer
    Patrick Rast
    Stijn H. Peeters
    Mike S. M. Jetten
    Anne-Kristin Kaster
    Manfred Rohde
    Nicolai Kallscheuer
    Christian Jogler
    Antonie van Leeuwenhoek, 2020, 113 : 1999 - 2018
  • [50] Nocardioides euryhalodurans sp. nov., Nocardioides seonyuensis sp. nov. and Nocardioides eburneiflavus sp. nov., isolated from soil
    Roh, Su Gwon
    Lee, Chan
    Kim, Min-Kyeong
    Kang, Hye-Jeong
    Kim, Yeong Seok
    Kim, Min Ji
    Malik, Adeel
    Kim, Seung Bum
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (04) : 2682 - 2689