Complete mitogenome of common myna (Acridotheres tristis) - characterization and phylogenetic implications
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Ray, Swapna Devi
[1
,2
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Dey, Prateek
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Salim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Bharathiar Univ, Coimbatore 641046, Tamil Nadu, IndiaSalim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Dey, Prateek
[1
,2
]
Sarkar, Indrani
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Salim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, IndiaSalim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Sarkar, Indrani
[1
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Sharma, Sanjeev Kumar
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Salim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, IndiaSalim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Sharma, Sanjeev Kumar
[1
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Quadros, Goldin
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Salim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, IndiaSalim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Quadros, Goldin
[1
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Pramod, Padmanabhan
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Salim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, IndiaSalim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Pramod, Padmanabhan
[1
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Kochiganti, Venkata Hanumat Sastry
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Natl Inst Anim Nutr & Physiol, Bengaluru 560030, IndiaSalim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Kochiganti, Venkata Hanumat Sastry
[3
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Singh, Ram Pratap
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Cent Univ South Bihar, Dept Life Sci, Gaya 824236, Bihar, IndiaSalim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
Singh, Ram Pratap
[4
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[1] Salim Ali Ctr Ornithol & Nat Hist, Coimbatore 641108, Tamil Nadu, India
[2] Bharathiar Univ, Coimbatore 641046, Tamil Nadu, India
[3] Natl Inst Anim Nutr & Physiol, Bengaluru 560030, India
[4] Cent Univ South Bihar, Dept Life Sci, Gaya 824236, Bihar, India
Common myna (Acridotheres tristis) is a member of the Sturnidae family with widespread natural and introduced habitat range across many continents. Acridotheres tristis population thrives in close association with human settlements and agricultural fields making it one of the most invasive bird species worldwide. For better management and conservation of A. tristis species, genetic information collected from various locations throughout its habitat range is necessary. Hence, we sequenced A. tristis mitogenome (NCBI accession no. OK542103) using NGS tools and characterized 37 genes (including the Protein Coding Genes, tRNA and rRNA) in the newly sequenced mitogenome. Codon usage analysis of selected mitogenomes investigated in this study revealed the third position of codons were mostly predominated by cytosine (C3) followed by adenine (A3). From the dN/dS analysis the strongest purifying selection was observed on nad4l (0.04 units) and the lowest on nad4 (0.34 units). The mitochondrial control region (CR) displayed identical ancestral avian CR gene order. Topology inferred from the concatenated mitogenome PCGs based phylogeny provided evidence for the clustering of Mimidae species within the Sturnidae family. Acridotheres as a genus is closely related to Sturnus cineraceus and Sturnus sericeus. The complete mitogenome of A. tristis sequenced in this study along with a comprehensive bioinformatics analysis of selected Sturnidae mitogenomes provides invaluable insights and genetic resources for designing future studies on A. tristis species with conservation and management implications.
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Univ Auckland, Sch Biol Sci, Auckland, New Zealand
Univ New South Wales, Evolut & Ecol Res Ctr, Sch Biol Earth & Environm Sci, Sydney, AustraliaUniv Auckland, Sch Biol Sci, Auckland, New Zealand
Stuart, Katarina C.
Johnson, Rebecca N.
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Smithsonian Inst, Natl Museum Nat Hist, Washington, DC USAUniv Auckland, Sch Biol Sci, Auckland, New Zealand
Johnson, Rebecca N.
Major, Richard E.
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Australian Museum, Australian Museum Res Inst, Sydney, AustraliaUniv Auckland, Sch Biol Sci, Auckland, New Zealand
Major, Richard E.
Atsawawaranunt, Kamolphat
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Univ Auckland, Sch Biol Sci, Auckland, New ZealandUniv Auckland, Sch Biol Sci, Auckland, New Zealand
Atsawawaranunt, Kamolphat
Ewart, Kyle M.
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Australian Museum, Australian Museum Res Inst, Sydney, Australia
Univ Sydney, Sch Life & Environm Sci, Sydney, AustraliaUniv Auckland, Sch Biol Sci, Auckland, New Zealand
Ewart, Kyle M.
Rollins, Lee A.
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机构:Univ Auckland, Sch Biol Sci, Auckland, New Zealand
Rollins, Lee A.
Santure, Anna W.
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Univ Auckland, Sch Biol Sci, Auckland, New ZealandUniv Auckland, Sch Biol Sci, Auckland, New Zealand