African swine fever virus P72 genotyping tool

被引：3
|
作者：
Dinhobl, Mark [1 ,2 ,3 ]
Spinard, Edward [1 ,2 ,3 ]
Birtley, Hillary [2 ,3 ,4 ]
Tesler, Nicolas [2 ,3 ,4 ]
Borca, Manuel V. [1 ,2 ,3 ]
Gladue, Douglas P. [1 ,2 ,3 ]
机构：
[1] ARS, USDA, Foreign Anim Dis Res Unit, Natl Bio & Agrodef Facil, Manhattan, KS 66502 USA
[2] ARS, USDA, Foreign Anim Dis Res Unit, Plum Isl Anim Dis Ctr, Orient, NY 11957 USA
[3] Ctr Excellence African Swine fever Genom, Guilford, CT 06437 USA
[4] Oak Ridge Inst Sci & Educ ORISE, Oak Ridge, TN USA
来源：
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2024年 / 13卷 / 02期
关键词：
ASFV; African swine fever; ASF; African swine fever virus; P72; tool; genotyping; swine;
D O I：
10.1128/mra.00891-23
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
Historically, genotyping of African swine fever virus was based on partial sequencing of B646L (p72). Until recently, the number of differences that defined genotypes was ambiguous. This tool allows a sequence to be uploaded and will report its closest matches along with its likely p72 genotype.
引用
收藏
页数：3
相关论文
共 50 条
  • [31] Development of a p72 trimer-based colloidal gold strip for detection of antibodies against African swine fever virus
    Geng, Rui
    Sun, Yaning
    Li, Rui
    Yang, Jifei
    Ma, Hongfang
    Qiao, Zixuan
    Lu, Qingxia
    Qiao, Songlin
    Zhang, Gaiping
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2022, 106 (07) : 2703 - 2714
  • [32] Development of a fully automated chemiluminescent immunoassay for the quantitative and qualitative detection of antibodies against African swine fever virus p72
    Wang, Lei
    Li, Duan
    Zeng, Daoping
    Wang, Shuangyun
    Wu, Jianwen
    Liu, Yanlin
    Peng, Guoliang
    Xu, Zheng
    Jia, Hong
    Song, Changxu
    MICROBIOLOGY SPECTRUM, 2024, 12 (10):
  • [33] Development and evaluation of multi-epitope protein p72 (MeP72) for the serodiagnosis of African swine fever
    Zhang, Xingxing
    Guo, Jing
    Wang, Lixia
    Li, Zhiyuan
    Liu, Yucheng
    Tian, Lulu
    Xiao, Chencheng
    Li, Yanfang
    Cai, Xuepeng
    Meng, Qingling
    Qiao, Jun
    ACTA VIROLOGICA, 2021, 65 (03) : 273 - 278
  • [34] Comparative analysis of the complete genome sequences of Kenyan African swine fever virus isolates within p72 genotypes IX and X
    Bishop, Richard P.
    Fleischauer, Clare
    de Villiers, Etienne P.
    Okoth, Edward A.
    Arias, Marisa
    Gallardo, Carmina
    Upton, Chris
    VIRUS GENES, 2015, 50 (02) : 303 - 309
  • [35] Comparative analysis of the complete genome sequences of Kenyan African swine fever virus isolates within p72 genotypes IX and X
    Richard P. Bishop
    Clare Fleischauer
    Etienne P. de Villiers
    Edward A. Okoth
    Marisa Arias
    Carmina Gallardo
    Chris Upton
    Virus Genes, 2015, 50 : 303 - 309
  • [36] Linear epitopes in African swine fever virus p72 recognized by monoclonal antibodies prepared against baculovirus-expressed antigen
    Heimerman, Mallory E.
    Murgia, Maria V.
    Wu, Ping
    Lowe, Andre D.
    Jia, Wei
    Rowland, Raymond R.
    JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 2018, 30 (03) : 406 - 412
  • [37] Genome comparison of African swine fever virus China/2018/AnhuiXCGQ strain and related European p72 Genotype II strains
    Bao, Jingyue
    Wang, Qinghua
    Lin, Peng
    Liu, Chunju
    Li, Lin
    Wu, Xiaodong
    Chi, Tianying
    Xu, Tiangang
    Ge, Shengqiang
    Liu, Yutian
    Li, Jinming
    Wang, Shujuan
    Qu, Hailong
    Jin, Tao
    Wang, Zhiliang
    TRANSBOUNDARY AND EMERGING DISEASES, 2019, 66 (03) : 1167 - 1176
  • [38] Regulated Emergence of the African swine fever virus: B646L (p72) Gene Based Bayesian Coalescent Analysis
    Venkataravana, Prabhakarareddy Anapalli
    Kumar, Santosh S. R.
    Suresh, Kuralayanapalya Puttahonnappa
    Patil, Sharanagouda S.
    Indrabalan, Uma Bharathi
    Sridevi, Rajangam
    Jayappa, Veeresh Santhebennur
    Kakkalameli, Siddappa B.
    Srinivasa, Chandrashekar
    Kollur, Shiva Prasad
    Shivamallu, Chandan
    INTERNATIONAL JOURNAL OF LIFE SCIENCE AND PHARMA RESEARCH, 2021, 11 (04): : L1 - L8
  • [39] Neutralizing antibodies to African swine fever virus proteins p30, p54, and p72 are not sufficient for antibody-mediated protection
    Neilan, JG
    Zsak, L
    Lu, Z
    Burrage, TG
    Kutish, GF
    Rock, DL
    VIROLOGY, 2004, 319 (02) : 337 - 342
  • [40] Genetic characterisation of African swine fever virus from 2017 outbreaks in Zambia: Identification of p72 genotype II variants in domestic pigs
    Simulundu, Edgar
    Sinkala, Yona
    Chambaro, Herman M.
    Chinyemba, Andrew
    Banda, Frank
    Mooya, Lynnfield E.
    Ndebe, Joseph
    Chitanga, Simbarashe
    Makungu, Chitwambi
    Munthali, Gift
    Fandamu, Paul
    Takada, Ayato
    Mweene, Aaron S.
    ONDERSTEPOORT JOURNAL OF VETERINARY RESEARCH, 2018, 85 (01)
12345