Molecular Detection and Identification of Plant-Associated Lactiplantibacillus plantarum

被引:5
|
作者
Skotniczny, Magdalena [1 ]
Satora, Pawel [1 ]
机构
[1] Agr Univ Krakow, Fac Food Technol, Dept Fermentat Technol & Microbiol, Balicka 122, PL-30149 Krakow, Poland
关键词
16S rRNA; housekeeping genes; genotyping; WGS; qPCR; shotgun; LACTIC-ACID BACTERIA; LACTOBACILLUS-PLANTARUM; GASTROINTESTINAL-TRACT; MICROBIAL DIVERSITY; SPECIES-DIVERSITY; GENETIC DIVERSITY; QUANTITATIVE PCR; RAPID DETECTION; STRAINS; OPTIMIZATION;
D O I
10.3390/ijms24054853
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lactiplantibacillus plantarum is a lactic acid bacterium often isolated from a wide variety of niches. Its ubiquity can be explained by a large, flexible genome that helps it adapt to different habitats. The consequence of this is great strain diversity, which may make their identification difficult. Accordingly, this review provides an overview of molecular techniques, both culture-dependent, and culture-independent, currently used to detect and identify L. plantarum. Some of the techniques described can also be applied to the analysis of other lactic acid bacteria.
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页数:14
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