Paenibacillus silvisoli sp. nov. and Paenibacillus humicola sp. nov., isolated from forest soil

被引:0
|
作者
Lee, Hyosun [1 ]
Chaudhary, Dhiraj Kumar [2 ]
Lim, Oung Bin [1 ]
Kim, Dong-Uk [1 ]
机构
[1] Sangji Univ, Coll Sci & Engn, Dept Biol Sci, Wonju 26339, South Korea
[2] Korea Univ, Coll Sci & Technol, Dept Environm Engn, Sejong Campus,2511 Sejong Ro, Sejong City 30019, South Korea
关键词
Paenibacillus silvisoli sp. nov; Paenibacillus humicola sp. nov; Forest soil; Paenibacillaceae; Taxonomy; ALGORITHM; IDENTIFICATION; SEQUENCES; ACCURATE;
D O I
10.1007/s00203-023-03763-x
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
During the study of microbial ecology of forest soil, two circular, white-colored bacterial colonies were isolated and labeled as strains TW38(T) and TW40(T). Both strains were catalase positive and oxidase negative. Strains TW38(T) and TW40(T) demonstrated growth within a temperature range of 10-37 degrees C and 18-37 degrees C, respectively, and thrived within a pH range of 5.5-9.0 and 6.0-8.0, respectively. Both strains grew at 0-2.0% (w/v) NaCl concentrations. The phylogenetic analysis indicated that strains TW38(T) and TW40(T) affiliated to the genus Paenibacillus, with the closest neighbors being Paenibacillus montanisoli RA17(T) (98.6%) and Paenibacillus arachidis E3(T) (95.4%), respectively. In both strains, the sole respiratory quinone was MK-7, the signature fatty acid was antiso-C-15:0, and the major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and phosphatidylcholine. The digital DNA-DNA hybridization and the average nucleotide identity values between TW38(T), TW40(T), and closest reference strains were < 29.0% and < 85.0%, respectively. The DNA G+C content of TW38(T) and TW40(T) was 54.5% and 57.1%, respectively. In general, the phylogenetic, genomics, chemotaxonomic, and phenotypic data support the differentiation of TW38(T) and TW40(T) from other closest members of the genus Paenibacillus. Thus, we conclude both strains TW38(T) and TW40(T) represent novel species of the genus Paenibacillus, for which the name Paenibacillus silvisoli sp. nov. and Paenibacillus humicola sp. nov. are proposed, respectively. The type strain of Paenibacillus silvisoli is TW38(T) (= KCTC 43468(T) = NBRC 116015(T)) and type strain of Paenibacillus humicola is TW40(T) (= KCTC 43469(T) = NBRC 116016(T)).
引用
收藏
页数:8
相关论文
共 50 条
  • [41] Paenibacillus massiliensis sp nov., Paenibacillus sanguinis sp nov and Paenibacillus timonensis sp nov., isolated from blood cultures
    Roux, V
    Raoult, D
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 : 1049 - 1054
  • [42] Paenibacillus terreus sp nov., isolated from forest soil
    Huang, Zhi
    Dai, Wenjuan
    Zhou, Zhijun
    Wang, Guoxiang
    Lin, Guoqing
    Yan, Xixue
    Zhao, Fei
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 243 - 247
  • [43] Paenibacillus pinistramenti sp. nov., isolated from pine litter
    Lee, Hyo-Jin
    Shin, Seung-Yeol
    Whang, Kyung-Sook
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2020, 113 (02): : 155 - 163
  • [44] Paenibacillus oceani sp. nov., isolated from surface seawater
    Chen, Yu-Feng
    Ye, Lin
    Huang, Hui-Qin
    Jiang, Ming-Guo
    Hu, Yong-Hua
    Sun, Dong-Mei
    Mo, Kun-Lian
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (09)
  • [45] Paenibacillus pinistramenti sp. nov., isolated from pine litter
    Hyo-Jin Lee
    Seung-Yeol Shin
    Kyung-Sook Whang
    [J]. Antonie van Leeuwenhoek, 2020, 113 : 155 - 163
  • [46] Paenibacillus rigui sp. nov., isolated from a freshwater wetland
    Baik, Keun Sik
    Lim, Chae Hong
    Choe, Han Na
    Kim, Eun Mi
    Seong, Chi Nam
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 529 - 534
  • [47] Paenibacillus oryzisoli sp. nov., isolated from the rhizosphere of rice
    Jun Zhang
    Xiao-Tong Ma
    Jun-Sheng Gao
    Cai-Wen Zhang
    Juan-Juan Zhao
    Rui-Jie Zhang
    Li-An Ma
    Xiao-Xia Zhang
    [J]. Antonie van Leeuwenhoek, 2017, 110 : 69 - 75
  • [48] Paenibacillus nicotianae sp. nov., isolated from a tobacco sample
    Qing-Qing Li
    Xing-Kui Zhou
    Li-Zhi Dang
    Juan Cheng
    Wael N. Hozzein
    Min-Jiao Liu
    Qun Hu
    Wen-Jun Li
    Yan-Qing Duan
    [J]. Antonie van Leeuwenhoek, 2014, 106 : 1199 - 1205
  • [49] Paenibacillus filicis sp. nov., isolated from the rhizosphere of the fern
    Byung-Chun Kim
    Mi Na Kim
    Kang Hyun Lee
    Sun Beom Kwon
    Kyung Sook Bae
    Kee-Sun Shin
    [J]. The Journal of Microbiology, 2009, 47 : 524 - 529
  • [50] Paenibacillus puldeungensis sp. nov., isolated from a grassy sandbank
    Traiwan, Jitsopin
    Park, Mi-Hak
    Kim, Wonyong
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 670 - 673