A data science practicum to introduce undergraduate students to bioinformatics for research

被引:1
|
作者
Bartlett, Bjarne [1 ]
Stitt-Bergh, Monica [2 ]
Kantar, Michael [3 ]
Bingham, Jon-Paul [1 ]
机构
[1] Univ Hawaii Manoa, Dept Mol Biosci & Bioengn, Honolulu, HI 96822 USA
[2] Univ Hawaii Manoa, Assessment & Curriculum Support Ctr, Honolulu, HI USA
[3] Univ Hawaii Manoa, Dept Trop Plant & Soil Sci, Honolulu, HI USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
big data; bioinformatics; computational biology; data science for undergraduates; data science practicum; independent research;
D O I
10.1002/bmb.21762
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
An explosion of data available in the life sciences has shifted the discipline toward genomics and quantitative data science research. Institutions of higher learning have been addressing this shift by modifying undergraduate curriculums resulting in an increasing number of bioinformatics courses and research opportunities for undergraduates. The goal of this study was to explore how a newly designed introductory bioinformatics seminar could leverage the combination of in-class instruction and independent research to build the practical skill sets of undergraduate students beginning their careers in the life sciences. Participants were surveyed to assess learning perceptions toward the dual curriculum. Most students had a neutral or positive interest in these topics before the seminar and reported increased interest after the seminar. Students had increases in confidence level in their bioinformatic proficiency and understanding of ethical principles for data/genomic science. By combining undergraduate research with directed bioinformatics skills, classroom seminars facilitated a connection between student's life sciences knowledge and emerging research tools in computational biology.
引用
收藏
页码:520 / 528
页数:9
相关论文
共 50 条
  • [31] Introducing Undergraduate Students to Science
    De Avila, Paulo, Jr.
    Torres, Bayardo B.
    [J]. BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION, 2010, 38 (02) : 70 - 78
  • [32] Investigating Graduate Education and Undergraduate Research Intentions of College Science Students
    Deemer, Eric D.
    Navarro, Rachel L.
    Byars-Winston, Angela M.
    Jensen, Laura E.
    Chen, Catherine P.
    [J]. JOURNAL OF CAREER ASSESSMENT, 2020, 28 (01) : 43 - 58
  • [33] Lane College Science Club: Engaging Students in Undergraduate Research and Outreach
    Van Stry, Melanie
    Carter, Candace Jones
    Gaber, Farag
    [J]. FASEB JOURNAL, 2021, 35
  • [34] Students with Disabilities in Life Science Undergraduate Research Experiences: Challenges and Opportunities
    Gin, Logan E.
    Pais, Danielle
    Cooper, Katelyn M.
    Brownell, Sara E.
    [J]. CBE-LIFE SCIENCES EDUCATION, 2022, 21 (02):
  • [35] Students' Profile of Science Process in Conducting Physics Practicum
    Kahar, Muhammad Syahrul
    Wekke, Ismail Suardi
    Ibrahim, Ibrahim
    Amri, Irman
    Pristianto, Hendrik
    [J]. INTERNATIONAL CONFERENCE OF SCIENCE EDUCATORS AND TEACHERS (ISET) 2018: : PROCEEDINGS OF THE 6TH INTERNATIONAL CONFERENCE FOR SCIENCE EDUCATORS AND TEACHERS (ISET) 2018, 2019, 2081
  • [36] Undergraduate Research or Research-Based Courses: Which Is Most Beneficial for Science Students?
    Olivares-Donoso, Ruby
    Gonzalez, Carlos
    [J]. RESEARCH IN SCIENCE EDUCATION, 2019, 49 (01) : 91 - 107
  • [37] Undergraduate Research or Research-Based Courses: Which Is Most Beneficial for Science Students?
    Ruby Olivares-Donoso
    Carlos González
    [J]. Research in Science Education, 2019, 49 : 91 - 107
  • [38] Genomics and Bioinformatics in Undergraduate Curricula: Contexts for Hybrid Laboratory/Lecture Courses for Entering and Advanced Science Students
    Temple, Louise
    Cresawn, Steven G.
    Monroe, Jonathan D.
    [J]. BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION, 2010, 38 (01) : 23 - 28
  • [39] Teaching bioinformatics to computer science students
    Ackovska, N
    Madevska-Bogdanova, A
    [J]. Eurocon 2005: The International Conference on Computer as a Tool, Vol 1 and 2 , Proceedings, 2005, : 811 - 814
  • [40] Molecular dynamics simulations and analysis for bioinformatics undergraduate students
    Justino, Goncalo C.
    Nascimento, Catarina P.
    Justino, Marta C.
    [J]. BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION, 2021, 49 (04) : 570 - 582