SSR Analysis of Genetic Diversity Among 192 Diploid Potato Cultivars

被引:14
|
作者
SONG Xiaoyan [1 ]
ZHANG Chunzhi [2 ,3 ]
LI Ying [2 ]
FENG Shuangshuang [1 ,2 ]
YANG Qing [1 ]
HUANG Sanwen [2 ,3 ]
机构
[1] College of Life Science,Nanjing Agricultural University
[2] Key Laboratory of Biology and Genetic Improvement of Horticultural Crops,Ministry of Agriculture,Institute of Vegetables and Flowers,Chinese Academy of Agricultural Sciences
[3] Agricultural Genomic Institute at Shenzhen,Chinese Academy of Agricultural Sciences
基金
中国国家自然科学基金;
关键词
SSR markers; genetic diversity; diploid potato cultivars; DNA fingerprinting;
D O I
暂无
中图分类号
S532 [马铃薯(土豆)];
学科分类号
0901 ;
摘要
In potato breeding,it is difficult to improve the traits of interest at the tetraploid level due to the tetrasomic inheritance.A promising alternative is diploid breeding.Thus it is necessary to assess the genetic diversity of diploid potato germplasm for efficient exploration and deployment of desirable traits.In this study,we used SSR markers to evaluate the genetic diversity of diploid potato cultivars.To screen polymorphic SSR markers,55 pairs of SSR primers were employed to amplify 39 cultivars with relatively distant genetic relationships.Among them,12 SSR markers with high polymorphism located at 12 chromosomes were chosen to evaluate the genetic diversity of 192 diploid potato cultivars.The primers produced 6 to 18 bands with an average of 8.2 bands per primer.In total,98 bands were amplified from 192 cultivars,and 97 of them were polymorphic.Cluster analysis using UPGMA showed the genetic relationships of all accessions tested:186 of the 192 accessions could be distinguished by only 12 pairs of SSR primers,and the 192 diploid cultivars were divided into 11 groups,and 83.3% constituted the first group.Clustering results showed relatively low genetic diversity among 192 diploid cultivars,with closer relationship at the molecular level.The results can provide molecular basis for diploid potato breeding.
引用
收藏
页码:163 / 171
页数:9
相关论文
共 50 条
  • [41] Genetic diversity of carrot (Daucus carota L.) cultivars revealed by analysis of SSR loci
    Baranski, Rafal
    Maksylewicz-Kaul, Anna
    Nothnagel, Thomas
    Cavagnaro, Pablo F.
    Simon, Philipp W.
    Grzebelus, Dariusz
    GENETIC RESOURCES AND CROP EVOLUTION, 2012, 59 (02) : 163 - 170
  • [42] ASSESSMENT OF GENETIC DIVERSITY IN 55 HERBACEOUS PEONY CULTIVARS WITH SSR MARKERS
    Fan, Yongming
    Yang, Liuhui
    Wang, Qi
    Teixeira da Silva, Jaime A.
    Yu, Xiaonan
    GENETIKA-BELGRADE, 2023, 55 (01): : 387 - 400
  • [43] Assessing the genetic diversity of cultivars and wild soybeans using SSR markers
    Wang Min
    Li Run-zhi
    Yang Wan-ming
    Du Wei-jun
    AFRICAN JOURNAL OF BIOTECHNOLOGY, 2010, 9 (31): : 4857 - 4866
  • [44] Assessment of genetic diversity in cabbage cultivars using RAPD and SSR markers
    Bhawna Saxena
    Rajinder Kaur
    Satya Vrat Bhardwaj
    Journal of Crop Science and Biotechnology, 2011, 14 (3) : 191 - 196
  • [45] Analysis of diversity and relationships among Chinese orchid cultivars using EST-SSR markers
    Huang, Yan
    Li, Fang
    Chen, Kunsong
    BIOCHEMICAL SYSTEMATICS AND ECOLOGY, 2010, 38 (01) : 93 - 102
  • [46] Analysis of genetic diversity among persimmon cultivars using microsatellite markers
    Maria del Mar Naval
    Elena Zuriaga
    Simona Pecchioli
    Gerardo Llácer
    Edgardo Giordani
    María Luisa Badenes
    Tree Genetics & Genomes, 2010, 6 : 677 - 687
  • [47] AFLP analysis of genetic diversity within and among Coffea arabica cultivars
    D. Steiger
    C. Nagai
    P. Moore
    C. Morden
    R. Osgood
    R. Ming
    Theoretical and Applied Genetics, 2002, 105 : 209 - 215
  • [48] Analysis of genetic diversity among persimmon cultivars using microsatellite markers
    del Mar Naval, Maria
    Zuriaga, Elena
    Pecchioli, Simona
    Llacer, Gerardo
    Giordani, Edgardo
    Luisa Badenes, Maria
    TREE GENETICS & GENOMES, 2010, 6 (05) : 677 - 687
  • [49] AFLP analysis of genetic diversity within and among Coffea arabica cultivars
    Steiger, DL
    Nagai, C
    Moore, PH
    Morden, CW
    Osgood, RV
    Ming, R
    THEORETICAL AND APPLIED GENETICS, 2002, 105 (2-3) : 209 - 215
  • [50] Pathway-based analysis of anthocyanin diversity in diploid potato
    Parra-Galindo, Maria Angelica
    Soto-Sedano, Johana Carolina
    Mosquera-Vasquez, Teresa
    Roda, Federico
    PLOS ONE, 2021, 16 (04):