Genetic diversity and phylogenetic tree of Butis genus in the Vietnamese Mekong Delta based on mitochondrial cytochrome b gene sequences

被引:0
|
作者
Lam, Tran Thi Huyen [1 ]
Dinh, Quang Minh [2 ]
Nguyen, Ton Huu Duc [2 ]
Phan, Gieo Hoang [3 ]
机构
[1] Cuu Long Univ, Phu Quoi Ward, Inst High Qual Biotechnol Food Technol, Phu Quoi Ward, Vinh Long 890000, Vietnam
[2] Can Tho Univ, Sch Educ, Dept Biol, Xuan Khanh Ward, Can Tho 900000, Vietnam
[3] Kien Giang Univ, Fac Agr & Rural Dev, Kien Giang 920000, Vietnam
关键词
Genetic distances; Mitochondrial cytochrome b gene; Phylogeny; Mekong Delta; DNA BARCODES; EVOLUTION; TELEOSTEI; PERCIFORMES; GOBIIDAE; FISH; PHYLOGEOGRAPHY; MODEL;
D O I
10.1016/j.ejar.2024.07.006
中图分类号
Q17 [水生生物学];
学科分类号
071004 ;
摘要
The genus Butis comprises fishes with relatively small body size and wide salinity tolerance allowing them to adapt to various environments. This research aims to analyze their phylogenetic relationships through the mitochondrial cytochrome b gene (Cyt b) sequencing. The results revealed that the population of Butis species had nine haplotypes with a haplotype diversity index of 0.67-1.00. The Cyt b gene sequences were rich in %C (30-31%) and low in %G (14-16 %). %AT was always higher than %GC while the AT/GC ratio was constant between Cyt b sequences. The intraspecific genetic distances were 0.001-0.004; meanwhile, the interspecific genetic distances were 0.003-0.203. All B. koilomatodon were in clade I of the phylogeny with a bootstrap value of 69%. Butis humeralis and B. butis were not grouped by species as B. koilomatodon but interspersed in the subclades of clade II with bootstrap values as high as 100%. Simultaneous use of mitochondrial DNA and nuclear DNA barcoding is recommended to conduct more precise identification of B. humeralis and B. butis in future research due to their great similarity in morphology and Cyt b gene sequences.
引用
收藏
页码:498 / 505
页数:8
相关论文
共 50 条
  • [31] Phylogenetic relationships within genus leuciscus (Pisces, Cyprinidae) in Portuguese fresh waters, based on mitochondrial DNA cytochrome b sequences
    Brito, RM
    Briolay, J
    Galtier, N
    Bouvet, Y
    Coelho, MM
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 1997, 8 (03) : 435 - 442
  • [32] The Phylogenetic Relationships of the Gobioninae (Teleostei: Cyprinidae) Inferred from Mitochondrial Cytochrome b Gene Sequences
    Jinquan Yang
    Shunping He
    Jörg Freyhof
    Kai Witte
    Huanzhang Liu
    Hydrobiologia, 2006, 553 : 255 - 266
  • [33] The phylogenetic relationships of the gobioninae (Teleostei: Cyprinidae) inferred from mitochondrial cytochrome b gene sequences
    Yang, JQ
    He, SP
    Freyhof, J
    Witte, K
    Liu, HZ
    HYDROBIOLOGIA, 2006, 553 (1) : 255 - 266
  • [34] Phylogenetic relationships in the genus Erimystax (Actinopterygii: Cyprinidae) based on the cytochrome b gene
    Simons, AM
    COPEIA, 2004, (02) : 351 - 356
  • [35] Phylogenetic relationships in the genus Cyprinella (Actinopterygii: Cyprinidae) based on mitochondrial and nuclear gene sequences
    Schoenhuth, Susana
    Mayden, Richard L.
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2010, 55 (01) : 77 - 98
  • [36] THE GENETIC DIVERSITY OF KEJOBONG GOAT BASED ON CYTOCHROME B GENE
    Jiyanto
    Sutopo
    Kurnianto, E.
    JOURNAL OF THE INDONESIAN TROPICAL ANIMAL AGRICULTURE, 2014, 39 (02) : 75 - 82
  • [37] Genetic diversity of Triatoma infestans (Hemiptera: Reduviidae) in Chuquisaca, Bolivia based on the mitochondrial cytochrome b gene
    Giordano, R
    Cortez, JCP
    Paulk, S
    Stevens, L
    MEMORIAS DO INSTITUTO OSWALDO CRUZ, 2005, 100 (07): : 753 - 760
  • [38] Analysis of genetic diversity of domestic water buffaloes and anoas based on variations in the mitochondrial gene for cytochrome b
    Kikkawa, Y
    Yonekawa, H
    Suzuki, H
    Amano, T
    ANIMAL GENETICS, 1997, 28 (03) : 195 - 201
  • [39] Limited Genetic Diversity of Chinese Muscovy Duck (Cairina moschata) Revealed by Partial Sequences of Mitochondrial DNA Cytochrome b Gene
    Sun, Jing
    Huang, Jing
    Zhao, Xiaoling
    Zhong, Hang
    Zhu, Qing
    Liu, Yiping
    INFORMATION TECHNOLOGY AND AGRICULTURAL ENGINEERING, 2012, 134 : 279 - 282
  • [40] The origin and evolution of seahorses (genus Hippocampus):: a phylogenetic study using the cytochrome b gene of mitochondrial DNA
    Casey, SP
    Hall, HJ
    Stanley, HF
    Vincent, ACJ
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2004, 30 (02) : 261 - 272