Exploring genetic diversity in apricot (Prunus armeniaca L.) populations SSR markers

被引:0
|
作者
Shylla, Bunty [1 ]
Sharma, Dharam Paul [1 ]
Handa, Anil [2 ]
Thakur, Manisha [3 ]
Sharma, Pooja [3 ]
Negi, Narender [4 ]
机构
[1] Dr Yashwant Singh Parmar Univ Hort & Forestry, Coll Hort, Dept Fruit Sci, Solan, Himachal Prades, India
[2] Dr Yashwant Singh Parmar Univ Hort & Forestry, Coll Hort, Dept Plant Pathol, Plant Virol Lab, Solan, Himachal Prades, India
[3] Dr Yashwant Singh Parmar Univ Hort & Forestry, COLL HORT, Dept Biotechnol, SOLAN, Himachal Prades, India
[4] ICAR Natl Bur Plant Genet Resources, Shimla, Himachal Prades, India
关键词
Apricot; Genetic diversity; Phylogenetic analysis; SSR markers; SEQUENCE; GENOME;
D O I
10.1016/j.sajb.2024.11.030
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
The genetic diversity of apricot (Prunus armeniaca L.) germplasm in mid-hills of Himachal Pradesh was investigated using Simple Sequence Repeats (SSR) markers. Apricot, a fruit-bearing tree known for its high nutritional value, requires genetic diversity analysis for effective breeding and conservation efforts. Molecular characterization using 46 SSR markers produced a total of 974 alleles with an average of 33.59 alleles per locus and PIC values ranging from 0.16 to 0.50, indicating a high level of polymorphism. PCR products of indigenous collections and 'Shakarpara' revealed unique bands that were sequenced and subjected to BLAST, showing a high degree of homology with Prunus dulcis. A high quality reference genome for apricot is still unavailable, thereby limiting the elucidation of phenotypic associations with genetic background. Overall, this study provides valuable insights into the genetic diversity of apricot germplasm, crucial for sustainable breeding strategies, and need for integrating advanced genomic tools to further elucidate the genetic architecture of apricot. (c) 2024 SAAB. Published by Elsevier B.V. All rights are reserved, including those for text and data mining, training, and similar technologies.
引用
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页码:50 / 59
页数:10
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