Evolutionary induced survival trees for medical prognosis assessment

被引:0
|
作者
Kretowska, Malgorzata [1 ]
Kretowski, Marek [1 ]
机构
[1] Bialystok Tech Univ, Fac Comp Sci, Wiejska 45A, PL-15351 Bialystok, Poland
关键词
Survival analysis; Decision tree; Evolutionary computation; Integrated Brier score; DECISION TREES; REGRESSION; STRATIFICATION; INFERENCE; FAILURE; MODELS;
D O I
10.1016/j.asoc.2024.112674
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Survival analysis focuses on predicting the time of a specific event, known as failure. In the analysis of survival data, it is crucial to fully leverage censored observations for which we do not have precise event time information. Decision trees are among the most frequently applied machine learning techniques for survival analysis, but to adequately address this issue, it is necessary to transform them into survival trees. This involves equipping the leaves with, for instance, local Kaplan-Meier estimators. Until now, survival trees have predominantly been generated using a greedy approach through classical top-down induction that uses local optimization. Recently, one of the most promising directions in decision tree approach is global learning. The paper proposes an evolutionary algorithm for survival tree induction, which concurrently searches for the tree structure, univariate tests in internal nodes, and Kaplan-Meier estimators in leaves. The fitness function is based on an integrated Brier score, and by introducing a penalty term related to the tree size, it becomes possible to control the interpretability of the obtained predictor. The work investigated, among other aspects, the impact of censoring, and the results obtained from both synthetic and real-life medical datasets are encouraging. The comparison of the predictive ability of the proposed method with already-known univariate survival trees shows statistically significant differences.
引用
收藏
页数:14
相关论文
共 50 条
  • [41] On the complexity of constructing evolutionary trees
    Gasieniec, L
    Jansson, J
    Lingas, A
    Östlin, A
    JOURNAL OF COMBINATORIAL OPTIMIZATION, 1999, 3 (2-3) : 183 - 197
  • [42] ON THE DISTRIBUTION OF LENGTHS OF EVOLUTIONARY TREES
    CARTER, M
    HENDY, M
    PENNY, D
    SZEKELY, LA
    WORMALD, NC
    SIAM JOURNAL ON DISCRETE MATHEMATICS, 1990, 3 (01) : 38 - 47
  • [43] Evolutionary models of phylogenetic trees
    Pinelis, I
    PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2003, 270 (1522) : 1425 - 1431
  • [44] ESTIMATING THE RELIABILITY OF EVOLUTIONARY TREES
    PENNY, D
    HENDY, M
    MOLECULAR BIOLOGY AND EVOLUTION, 1986, 3 (05) : 403 - 417
  • [45] Cyclic permutations and evolutionary trees
    Semple, C
    Steel, M
    ADVANCES IN APPLIED MATHEMATICS, 2004, 32 (04) : 669 - 680
  • [46] Tree contractions and evolutionary trees
    Kao, MY
    ALGORITHMS AND COMPLEXITY, 1997, 1203 : 299 - 310
  • [47] EVOLUTIONARY TREES FOR THE GENUS BORDETELLA
    ALTSCHUL, SF
    JOURNAL OF BACTERIOLOGY, 1989, 171 (02) : 1211 - 1213
  • [48] Concentration inequality for evolutionary trees
    Mariadassou, M.
    Bar-Hen, A.
    JOURNAL OF MULTIVARIATE ANALYSIS, 2009, 100 (09) : 2055 - 2064
  • [49] Evolutionary Bayesian Rose Trees
    Liu, Shixia
    Wang, Xiting
    Song, Yangqiu
    Guo, Baining
    IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 2015, 27 (06) : 1533 - 1546
  • [50] On the complexity of comparing evolutionary trees
    Hein, J
    Jiang, T
    Wang, LS
    Zhang, KZ
    DISCRETE APPLIED MATHEMATICS, 1996, 71 (1-3) : 153 - 169