Solving NP-hard problems on GATEx graphs: Linear-time algorithms for perfect orderings, cliques, colorings, and independent sets

被引:0
|
作者
Hellmuth, Marc [1 ]
Scholz, Guillaume E. [2 ,3 ]
机构
[1] Stockholm Univ, Fac Sci, Dept Math, SE-10691 Stockholm, Sweden
[2] Univ Leipzig, Dept Comp Sci & Interdisciplinary, Bioinformat Grp, Hartelstr 16-18, D-04107 Leipzig, Germany
[3] Univ Leipzig, Interdisciplinary Ctr Bioinformat, Hartelstr 16-18, D-04107 Leipzig, Germany
关键词
Modular decomposition; Galled-tree; Cograph; NP-hard problems; Linear-time algorithms; MODULAR DECOMPOSITION; 2-STRUCTURES;
D O I
10.1016/j.tcs.2025.115157
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
The class of GAlled-Tree Explainable (GATEx) graphs has recently been discovered as a natural generalization of cographs. Cographs are precisely those graphs that can be uniquely represented by a rooted tree where the leaves correspond to the vertices of the graph. As a generalization, GATEx graphs are precisely those that can be uniquely represented by a particular rooted acyclic network, called a galled-tree. This paper explores the use of galled-trees to solve combinatorial problems on GATEx graphs that are, in general, NP-hard. We demonstrate that finding a maximum clique, an optimal vertex coloring, a perfect order, as well as a maximum independent set in GATEx graphs can be efficiently done in linear time. The key idea behind the linear-time algorithms is to utilize the galled-trees that explain the GATEx graphs as a guide for computing the respective cliques, colorings, perfect orders, or independent sets.
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页数:17
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