A focusing framework for testing bi-directional causal effects in Mendelian randomization

被引:0
|
作者
Li, Sai [1 ]
Ye, Ting [2 ]
机构
[1] Renmin Univ China, Inst Stat & Big Data, Beijing 100872, Peoples R China
[2] Univ Washington, Dept Biostat, Seattle, WA USA
基金
中国国家自然科学基金; 美国国家卫生研究院;
关键词
causal direction; hypothesis testing; invalid instruments; Mendelian randomization; pleiotropy; INVALID INSTRUMENTS; PLEIOTROPY; INFERENCE; MODELS; HEALTH;
D O I
10.1093/jrsssb/qkae101
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
Mendelian randomization (MR) is a powerful method that uses genetic variants as instrumental variables to infer the causal effect of a modifiable exposure on an outcome. We study inference for bi-directional causal relationships and causal directions with possibly pleiotropic genetic variants. We show that assumptions for common MR methods are often impossible or too stringent given the potential bi-directional relationships. We propose a new focusing framework for testing bi-directional causal effects and it can be coupled with many state-of-the-art MR methods. We provide theoretical guarantees for our proposal and demonstrate its performance using several simulated and real datasets.
引用
收藏
页数:20
相关论文
共 50 条
  • [31] Exploring the causal relationship between immune cells and idiopathic pulmonary fibrosis: a bi-directional Mendelian randomization study
    Zhao He
    Ruixin Wang
    Chenghu Song
    Jiwei Liu
    Ruo Chen
    Mingfeng Zheng
    Weici Liu
    Guanyu Jiang
    Wenjun Mao
    BMC Pulmonary Medicine, 24
  • [32] Causal Relationship between Obesity and Vitamin D Status: Bi-Directional Mendelian Randomization Analysis of Multiple Cohorts
    Vimaleswaran, Karani S.
    Berry, Diane J.
    Lu, Chen
    Tikkanen, Emmi
    Pilz, Stefan
    Hiraki, Linda T.
    Cooper, Jason D.
    Dastani, Zari
    Li, Rui
    Houston, Denise K.
    Wood, Andrew R.
    Michaelsson, Karl
    Vandenput, Liesbeth
    Zgaga, Lina
    Yerges-Armstrong, Laura M.
    McCarthy, Mark I.
    Dupuis, Josee
    Kaakinen, Marika
    Kleber, Marcus E.
    Jameson, Karen
    Arden, Nigel
    Raitakari, Olli
    Viikari, Jorma
    Lohman, Kurt K.
    Ferrucci, Luigi
    Melhus, Hakan
    Ingelsson, Erik
    Byberg, Liisa
    Lind, Lars
    Lorentzon, Mattias
    Salomaa, Veikko
    Campbell, Harry
    Dunlop, Malcolm
    Mitchell, Braxton D.
    Herzig, Karl-Heinz
    Pouta, Anneli
    Hartikainen, Anna-Liisa
    Streeten, Elizabeth A.
    Theodoratou, Evropi
    Jula, Antti
    Wareham, Nicholas J.
    Ohlsson, Claes
    Frayling, Timothy M.
    Kritchevsky, Stephen B.
    Spector, Timothy D.
    Richards, J. Brent
    Lehtimaki, Terho
    Ouwehand, Willem H.
    Kraft, Peter
    Cooper, Cyrus
    PLOS MEDICINE, 2013, 10 (02)
  • [33] Assessing the Causal Relationship Between Immune Cells and Temporomandibular Related Pain by Bi-Directional Mendelian Randomization Analysis
    He, Jianquan
    Chen, Xiayun
    JOURNAL OF PAIN RESEARCH, 2024, 17 : 3791 - 3800
  • [34] Detecting potential causal relationship between inflammatory bowel disease and rosacea using bi-directional Mendelian randomization
    Li, Min
    He, Si Xian
    He, Yuan Xiong
    Hu, Xiao Han
    Zhou, Zhou
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [35] Assessing the causal relationship between immune traits and systemic lupus erythematosus by bi-directional Mendelian randomization analysis
    Gu, Jie
    Yan, Guan-Min
    Kong, Xiao-Lin
    Zhang, Yin-Ying
    Huang, Li-Hong
    Lu, Hui-Min
    MOLECULAR GENETICS AND GENOMICS, 2023, 298 (06) : 1493 - 1503
  • [36] Causal relationship between genetically predicted depression and cancer risk: a two-sample bi-directional mendelian randomization
    Zhu, Guang-Li
    Xu, Cheng
    Yang, Kai-Bin
    Tang, Si-Qi
    Tang, Ling-Long
    Chen, Lei
    Li, Wen-Fei
    Mao, Yan-Ping
    Ma, Jun
    BMC CANCER, 2022, 22 (01)
  • [37] Relationship between Serum 25(OH)D and Depression: Causal Evidence from a Bi-Directional Mendelian Randomization Study
    Mulugeta, Anwar
    Lumsden, Amanda
    Hypponen, Elina
    NUTRIENTS, 2021, 13 (01) : 1 - 15
  • [38] Evaluation of bi-directional causal association between obstructive sleep apnoea syndrome and diabetic microangiopathy: a Mendelian randomization study
    Liu, Qianqian
    Chang, Xingyu
    Lian, Rongna
    Chen, Qi
    Wang, Jialei
    Fu, Songbo
    FRONTIERS IN CARDIOVASCULAR MEDICINE, 2024, 11
  • [39] Causal role of immune cell phenotypes in idiopathic sudden sensorineural hearing loss: a bi-directional Mendelian randomization study
    Li, Wanqing
    Zhou, Qiang
    Zhou, Linsa
    Cao, Longhe
    Zhu, Chuansai
    Dai, Zhijian
    Lin, Sen
    FRONTIERS IN NEUROLOGY, 2024, 15
  • [40] Causal associations and potential mechanisms between inflammatory skin diseases and IgA nephropathy: a bi-directional Mendelian randomization study
    Cao, Wenlong
    Xiong, Jing
    FRONTIERS IN GENETICS, 2024, 15