Robust Copy Number Alteration Detection (RCNA): A Novel Algorithm for Detecting Copy-Number Alterations for Targeted Gene Sequencing Experiments

被引：0
|
作者：
Jensen, Travis L. [1 ]
Bradley, Matthew [1 ]
Zhang, Ling [2 ]
Bejar, Rafael [3 ]
Lindsley, R. Coleman [4 ]
Walter, Matthew J. [5 ]
Goll, Johannes [1 ]
机构：
[1] Emmes Co, Rockville, MD USA
[2] H Lee Moffitt Canc Ctr & Res Inst, Hematopathol & Lab Med, Tampa, FL USA
[3] Univ Calif San Diego, La Jolla, CA USA
[4] Dana Farber Canc Inst, Boston, MA USA
[5] Washington Univ, Dept Med, Div Oncol, Sch Med, St Louis, MO USA
来源：
BLOOD | 2024年 / 144卷
关键词：
D O I：
10.1182/blood-2024-210552
中图分类号：
R5 [内科学];
学科分类号：
1002 ; 100201 ;
摘要：
637
引用
收藏
页码：3220 / 3221
页数：2
相关论文
共 50 条
  • [11] Detection of Somatic Copy Number Alterations in Cancer Using Targeted Exome Capture Sequencing
    Lonigro, Robert J.
    Grasso, Catherine S.
    Robinson, Dan R.
    Jing, Xiaojun
    Wu, Yi-Mi
    Cao, Xuhong
    Quist, Michael J.
    Tomlins, Scott A.
    Pienta, Kenneth J.
    Chinnaiyan, Arul M.
    NEOPLASIA, 2011, 13 (11): : 1019 - U45
  • [12] High-resolution mapping of copy-number alterations with massively parallel sequencing
    Chiang, Derek Y.
    Getz, Gad
    Jaffe, David B.
    O'Kelly, Michael J. T.
    Zhao, Xiaojun
    Carter, Scott L.
    Russ, Carsten
    Nusbaum, Chad
    Meyerson, Matthew
    Lander, Eric S.
    NATURE METHODS, 2009, 6 (01) : 99 - 103
  • [13] High-resolution mapping of copy-number alterations with massively parallel sequencing
    Chiang D.Y.
    Getz G.
    Jaffe D.B.
    O'Kelly M.J.T.
    Zhao X.
    Carter S.L.
    Russ C.
    Nusbaum C.
    Meyerson M.
    Lander E.S.
    Nature Methods, 2009, 6 (1) : 99 - 103
  • [14] Detection of Copy Number Alterations Using Single Cell Sequencing
    Knouse, Kristin A.
    Wu, Jie
    Hendricks, Austin
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2017, (120):
  • [15] Patterns of chromosomal copy-number alterations in intrahepatic cholangiocarcinoma
    Dalmasso, Cyril
    Carpentier, Wassila
    Guettier, Catherine
    Camilleri-Broet, Sophie
    Borelli, Wyllians Vendramini
    dos Santos, Cedalia Rosane Campos
    Castaing, Denis
    Duclos-Vallee, Jean-Charles
    Broet, Philippe
    BMC CANCER, 2015, 15
  • [16] Prognostic Significance of Copy-Number Alterations in Multiple Myeloma
    Avet-Loiseau, Herve
    Li, Cheng
    Magrangeas, Florence
    Gouraud, Wilfried
    Charbonnel, Catherine
    Harousseau, Jean-Luc
    Attal, Michel
    Marit, Gerald
    Mathiot, Claire
    Facon, Thierry
    Moreau, Philippe
    Anderson, Kenneth C.
    Campion, Loic
    Munshi, Nikhil C.
    Minvielle, Stephane
    JOURNAL OF CLINICAL ONCOLOGY, 2009, 27 (27) : 4585 - 4590
  • [17] SOMATIC COPY-NUMBER ALTERATIONS CONTRIBUTE TO BRAIN METASTASIS
    不详
    CANCER DISCOVERY, 2020, 10 (05) : 638 - 638
  • [18] Copy number variant detection tool for targeted sequencing data
    Vold, T.
    Singh, A. K.
    Lavik, L. A. S.
    Olsen, M. F.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2019, 27 : 1643 - 1644
  • [19] Detection of Copy Number Variations from Targeted Sequencing Data
    Gandin, Ilaria
    Vuckovic, Dragana
    HUMAN HEREDITY, 2013, 76 (02) : 106 - 106
  • [20] A Bayesian change-point algorithm for detecting copy number alteration
    Fridtjof Thomas
    Stanley Pounds
    BMC Bioinformatics, 11 (Suppl 4)
12345