In silico investigation of artocarpin, cycloarotcarpin, artocarpanone, and cyanomaclurin for Dengue virus inhibitor DEN2 NS2B/NS3 serine protease

被引:1
|
作者
Frimayanti, Neni [1 ]
Septama, Abdi Wira [2 ]
Teruna, Hilwan Yuda [3 ]
Rahmi, Eldiza Puji [4 ]
机构
[1] Sekolah Tinggi Ilmu Farm Riau, Dept Pharm, Jln Kamboja Panam, Pekanbaru Riau 28293, Indonesia
[2] Natl Res & Innovat Agcy BRIN, Res Ctr Pharmaceut Ingredients & Tradit Med, Kawasan Sains & Teknol KST Soekarno, Cibinong 16911, Indonesia
[3] Univ Riau, Fac Math & Nat Sci, Dept Chem, Pekanbaru Riau, Indonesia
[4] Univ Pembangunan Nas Vet Jakarta, Pharm Program, Jakarta, Indonesia
来源
关键词
Artocarpus heterophyllus; dengue; density functional theory; docking; pharmacophore; MOLECULAR DOCKING; IDENTIFICATION; 3D-QSAR;
D O I
10.56499/jppres24.2052_13.1.193
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Context: : Dengue virus (DENV) infection remains a significant global public health challenge that necessitates the development of novel therapeutic strategies. Aims: : To investigate compounds isolated from Artocarpus heterophyllus for their potential as inhibitors of the DENV NS2B/NS3 serine protease. Methods: : Initially, molecular docking was performed to predict the binding orientation of these flavonoid compounds with the serine protease enzyme. It was followed with pharmacophore, density functional theory (DFT), and ADMET-druglikeness. Results: : Results reveal promising interactions between cycloartocarpin and catalytic triad of the NS2B/NS3 protease. This promising candidate displayed the most stable conformation with the lowest gap energy during density functional theory simulation. Additionally, its ADMET profiles confirmed its drug-like properties. Conclusions: : Based on these findings, cycloartocarpin was selected as the reference compound for subsequent stages of drug design.
引用
收藏
页码:193 / 202
页数:10
相关论文
共 50 条
  • [21] Phosphonate inhibitors of West Nile virus NS2B/NS3 protease
    Skorenski, Marcin
    Milewska, Aleksandra
    Pyrc, Krzysztof
    Sienczyk, Marcin
    Oleksyszyn, Jozef
    JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY, 2019, 34 (01) : 8 - 14
  • [22] West Nile Virus NS2B/NS3 Protease As An Antiviral Target
    Chappell, K. J.
    Stoermer, M. J.
    Fairlie, D. P.
    Young, P. R.
    CURRENT MEDICINAL CHEMISTRY, 2008, 15 (27) : 2771 - 2784
  • [23] Homology model of the dengue 2 virus NS3 protease: putative interactions with both substrate and NS2B cofactor
    Brinkworth, RI
    Fairlie, DP
    Leung, D
    Young, PR
    JOURNAL OF GENERAL VIROLOGY, 1999, 80 : 1167 - 1177
  • [24] The Inhibition of NS2B/NS3 Protease: A New Therapeutic Opportunity to Treat Dengue and Zika Virus Infection
    Starvaggi, Jose
    Previti, Santo
    Zappala, Maria
    Ettari, Roberta
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2024, 25 (08)
  • [25] QM/MM Study on Cleavage Mechanism Catalyzed by Zika Virus NS2B/NS3 Serine Protease
    Nutho, Bodee
    Mulholland, Adrian
    Rungrotmongkol, Thanyada
    BIOPHYSICAL JOURNAL, 2019, 116 (03) : 559A - 559A
  • [26] Structure-based design of a novel inhibitor of the ZIKA virus NS2B/NS3 protease
    Xiong, Yanchao
    Cheng, Fei
    Zhang, Junyi
    Su, Haixia
    Hu, Hangchen
    Zou, Yi
    Li, Minjun
    Xu, Yechun
    BIOORGANIC CHEMISTRY, 2022, 128
  • [27] Zika Virus Targeting by Screening Inhibitors against NS2B/NS3 Protease
    Choudhry, Hani
    Alzahrani, Faisal A.
    Hassan, Mohammed A.
    Alghamdi, Asma
    Abdulaal, Wesam H.
    Bakhrebah, Muhammed A.
    Zamzami, Mazin A.
    Helmi, Nawal
    Bokhari, Fawzi F.
    Zeyadi, Mustafa
    Baothman, Othman A.
    Kamal, Mohammad A.
    Warsi, Mohiuddin K.
    Ali, Ashraf
    Jarullah, Bushra
    Jamal, Mohammad S.
    BIOMED RESEARCH INTERNATIONAL, 2019, 2019
  • [28] Exploring the antiviral inhibitory activity of Niloticin against the NS2B/ NS3 protease of Dengue virus (DENV2)
    Stalin, Antony
    Han, Jiajia
    Reegan, Appadurai Daniel
    Ignacimuthu, Savarimuthu
    Liu, Shuwen
    Yao, Xingang
    Zou, Quan
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 277
  • [29] Functional determinants of NS2B for activation of Japanese encephalitis virus NS3 protease
    Lin, Cheng-Wen
    Huang, Hong-Da
    Shiu, Shi-Yi
    Chen, Wei-June
    Tsai, Ming-Hong
    Huang, Su-Hua
    Wan, Lei
    Lin, Ying-Ju
    VIRUS RESEARCH, 2007, 127 (01) : 88 - 94
  • [30] Binding mode of the activity-modulating C-terminal segment of NS2B to NS3 in the dengue virus NS2B-NS3 protease
    de la Cruz, Laura
    Chen, Wan-Na
    Graham, Bim
    Otting, Gottfried
    FEBS JOURNAL, 2014, 281 (06) : 1517 - 1533