N6-Methylandenosine-related lncRNAs as potential biomarkers for predicting prognosis and the immunotherapy response in pancreatic cancer

被引:0
|
作者
Bai, Zhihui [1 ,2 ]
Xia, Qianlin [3 ]
Xu, Wanli [1 ]
Wu, Zhirong [4 ]
He, Xiaomeng [5 ]
Zhang, Xin [1 ]
Wang, Zhefeng [2 ,6 ]
Luo, Mengting [1 ]
Sun, Huaqin [1 ]
Liu, Songmei [7 ]
Wang, Jin [1 ,2 ,5 ]
机构
[1] Fudan Univ, Zhongshan Hosp Xiamen, Cent Lab, Xiamen 361015, Peoples R China
[2] Xiamen Key Lab Biotherapy, Xiamen 361015, Peoples R China
[3] Shanghai Jiao Tong Univ, Lab Med, Shanghai Sixth Peoples Hosp, Sch Med, Shanghai 200233, Peoples R China
[4] Fudan Univ, Zhongshan Hosp Xiamen, Dept Gen Surg, Xiamen 361015, Peoples R China
[5] Fudan Univ, Shanghai Publ Hlth Clin Ctr, 2901 Langlang Rd, Shanghai, Peoples R China
[6] Clin Res Ctr Precis Med Abdominal Tumor Fujian Pro, Xiamen, Peoples R China
[7] Zhongnan Hosp Wuhan Univ, Ctr Gene Diag & Program Clin Lab, Dept Clin Lab, Wuhan, Peoples R China
关键词
Pancreatic cancer; lncRNA; m6A; Prognosis; Immunotherapy; IMMUNE-RESPONSES; RNA;
D O I
10.1007/s00018-024-05573-w
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Emerging evidence has shown that the N6-methyladenosine (m6A) modification of RNA plays key roles in tumorigenesis and the progression of various cancers. However, the potential roles of the m6A modification of long noncoding RNAs (lncRNAs) in pancreatic cancer (PaCa) are still unknown. To analyze the prognostic value of m6A-related lncRNAs in PaCa, an m6A-related lncRNA signature was constructed as a risk model via Pearson's correlation and univariate Cox regression analyses in The Cancer Genome Atlas (TCGA) database. The tumor microenvironment (TME), tumor mutation burden, and drug sensitivity of PaCa were investigated by m6A-related lncRNA risk score analyses. We established an m6A-related risk prognostic model consisting of five lncRNAs, namely, LINC01091, AC096733.2, AC092171.5, AC015660.1, and AC005332.6, which not only revealed significant differences in immune cell infiltration associated with the TME between the high-risk and low-risk groups but also predicted the potential benefit of immunotherapy for patients with PaCa. Drugs such as WZ8040, selumetinib, and bortezomib were also identified as more effective for high-risk patients. Our results indicate that the m6A-related lncRNA risk model could be an independent prognostic indicator, which may provide valuable insights for identifying therapeutic approaches for PaCa.
引用
收藏
页数:15
相关论文
共 50 条
  • [31] Construction of a pyroptosis-related lncRNAs signature for predicting prognosis and immunotherapy response in glioma
    Huang, Qianrong
    Yan, Jun
    Jiang, Qian
    Guo, Fangzhou
    Mo, Ligen
    Deng, Teng
    MEDICINE, 2023, 102 (06)
  • [32] m6A-related lncRNAs are potential biomarkers for the prognosis of COAD patients
    Xu, Chenyang
    He, Tingting
    Shao, Xinxin
    Gao, Ling
    Cao, Lei
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [33] Necroptosis-related lncRNAs: biomarkers for predicting prognosis and immune response in lung adenocarcinoma
    Lin, Chunxuan
    Lin, Kunpeng
    Lin, Xiaochun
    Yuan, Hai
    Zhang, Yingying
    Xie, Zhijun
    Dai, Yong
    Liu, Luhao
    Shimada, Yoshihisa
    Goto, Taichiro
    Okuda, Katsuhiro
    Liu, Taisheng
    Wei, Chenggong
    TRANSLATIONAL LUNG CANCER RESEARCH, 2024, 13 (10)
  • [34] N6-methyladenosine-related lncRNAs identified as potential biomarkers for predicting the overall survival of Asian gastric cancer patients
    Shuyu Xu
    Wenlong Chen
    Yiwen Wang
    Yuxin Zhang
    Rong Xia
    Jiemiao Shen
    Xing Gong
    Yinyin Liang
    Jiayi Xu
    Hua Tang
    Tie Zhao
    Yi Zhang
    Tao Chen
    Chao Wang
    BMC Cancer, 22
  • [35] N6-methyladenosine-related lncRNAs identified as potential biomarkers for predicting the overall survival of Asian gastric cancer patients
    Xu, Shuyu
    Chen, Wenlong
    Wang, Yiwen
    Zhang, Yuxin
    Xia, Rong
    Shen, Jiemiao
    Gong, Xing
    Liang, Yinyin
    Xu, Jiayi
    Tang, Hua
    Zhao, Tie
    Zhang, Yi
    Chen, Tao
    Wang, Chao
    BMC CANCER, 2022, 22 (01)
  • [36] Identification of m6A-related lncRNAs prognostic signature for predicting immunotherapy response in cervical cancer
    Ping, Quanhong
    Chen, Qi
    Li, Na
    SLAS TECHNOLOGY, 2024, 29 (06):
  • [37] Identification of N6-methylandenosine-related lncRNA for tuberculosis diagnosis in person living with human immunodeficiency virus
    Xu, Shaohua
    Yuan, Huicheng
    Li, Ling
    Yang, Kai
    Zhao, Liangcun
    TUBERCULOSIS, 2023, 140
  • [38] Integrative Analysis Reveals Potentially Functional N6-Methylandenosine-Related Long Noncoding RNAs in Colon Adenocarcinoma
    Tan, Xinjie
    Li, Qian
    Zhang, Qinya
    Fan, Gang
    Liu, Zhuo
    Zhou, Kunyan
    FRONTIERS IN GENETICS, 2021, 12
  • [39] Dissecting the Role of N6-Methylandenosine-Related Long Non-Coding RNAs Signature in Prognosis and Immune Microenvironment of Breast Cancer (vol 10, 711859, 2021)
    Zhang, Jinguo
    Shan, Benjie
    Lin, Lin
    Dong, Jie
    Sun, Qingqing
    Zhou, Qiong
    Chen, Jian
    Han, Xinghua
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [40] Comprehensive analysis of anoikis-related lncRNAs for predicting prognosis and response of immunotherapy in hepatocellular carcinoma
    Du, Sihao
    Cao, Ke
    Wang, Zhenshun
    Lin, Dongdong
    IET SYSTEMS BIOLOGY, 2023, 17 (04) : 198 - 211