Molecular dynamics of RNA with the OPLS force field. Aqueous simulation of a hairpin containing a tetranucleotide loop

被引：0
|
作者：
机构：
来源：
| 1600年 / ACS, Washington, DC, USA卷 / 117期
关键词：
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [31] COMP 95-Molecular dynamics simulations of RNA and the force field performance
    Sponer, Jiri
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2008, 236
  • [32] PHYS 405-Atomistic molecular dynamics simulations of poly (ethylene oxide) aqueous solutions as a function of concentration and temperature using polarizable force field.
    Starovoytov, Oleg N.
    Borodin, Oleg
    Bedrov, Dmitry
    Smith, Grant D.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2009, 237
  • [33] Molecular dynamics simulation for the test of calibrated OPLS-AA force field for binary liquid mixture of tri-iso-amyl phosphate and n-dodecane
    Das, Arya
    Ali, Sk. Musharaf
    JOURNAL OF CHEMICAL PHYSICS, 2018, 148 (07):
  • [34] Molecular dynamics simulation of the sodium octanoate micelle in aqueous solution: Comparison of force field parameters and molecular topology effects on the micellar structure.
    de Moura, AF
    Freitas, LCG
    BRAZILIAN JOURNAL OF PHYSICS, 2004, 34 (01) : 64 - 72
  • [35] SIMPLE METHOD TO MODIFY FORCE FIELDS FOR THE MOLECULAR DYNAMICS SIMULATION OF AQUEOUS ALCOHOL SOLUTIONS
    V. A. Nichiporenko
    E. D. Kadtsyn
    N. N. Medvedev
    Journal of Structural Chemistry, 2022, 63 : 1802 - 1810
  • [36] SIMPLE METHOD TO MODIFY FORCE FIELDS FOR THE MOLECULAR DYNAMICS SIMULATION OF AQUEOUS ALCOHOL SOLUTIONS
    Nichiporenko, V. A.
    Kadtsyn, E. D.
    Medvedev, N. N.
    JOURNAL OF STRUCTURAL CHEMISTRY, 2022, 63 (11) : 1802 - 1810
  • [37] GAFFlipid: a General Amber Force Field for the accurate molecular dynamics simulation of phospholipid
    Dickson, Callum J.
    Rosso, Lula
    Betz, Robin M.
    Walker, Ross C.
    Gould, Ian R.
    SOFT MATTER, 2012, 8 (37) : 9617 - 9627
  • [38] A Generic Force Field for Protein Coarse-Grained Molecular Dynamics Simulation
    Gu, Junfeng
    Bai, Fang
    Li, Honglin
    Wang, Xicheng
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2012, 13 (11): : 14451 - 14469
  • [39] A reactive force field molecular dynamics simulation of nickel oxidation in supercritical water
    Ai, Liqiang
    Zhou, Yusi
    Huang, Haishen
    Lv, Yongjun
    Chen, Min
    JOURNAL OF SUPERCRITICAL FLUIDS, 2018, 133 : 421 - 428
  • [40] Molecular Dynamics Simulation of Phospholipid Bilayers and Monolayers Using a Polarizable Force Field
    Harder, Edward
    Roux, Benoit
    MacKerell, Alex D., Jr.
    BIOPHYSICAL JOURNAL, 2010, 98 (03) : 10A - 10A
12345