Fecal source tracking in water by next-generation sequencing technologies using host-specific escherichia coli genetic markers

被引:0
|
作者
Gomi, Ryota [1 ]
Matsuda, Tomonari [2 ]
Matsui, Yasuto [1 ]
Yoneda, Minoru [1 ]
机构
[1] Department of Environmental Engineering, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, 615-8540, Kyoto, Japan
[2] Research Center for Environmental Quality Management, Kyoto University, 1-2 Yumihama, Otsu, 520-0811, Shiga, Japan
来源
Environmental Science and Technology | 2014年 / 48卷 / 16期
关键词
Aquatic environments - Fecal pollution - Genomic regions - Microbial source tracking - Next-generation sequencing - Source of waters - Source tracking - Water-borne disease;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
页码:9616 / 9623
相关论文
共 50 条
  • [21] Use of a genetically-engineered Escherichia coli strain as a sample process control for quantification of the host-specific bacterial genetic markers
    Kobayashi, Ayano
    Sano, Daisuke
    Taniuchi, Asami
    Ishii, Satoshi
    Okabe, Satoshi
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2013, 97 (20) : 9165 - 9173
  • [22] Use of a genetically-engineered Escherichia coli strain as a sample process control for quantification of the host-specific bacterial genetic markers
    Ayano Kobayashi
    Daisuke Sano
    Asami Taniuchi
    Satoshi Ishii
    Satoshi Okabe
    Applied Microbiology and Biotechnology, 2013, 97 : 9165 - 9173
  • [23] Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples
    Shanks, Orin C.
    Santo Domingo, Jorge W.
    Lamendella, Regina
    Kelty, Catherine A.
    Graham, James E.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (06) : 4054 - 4060
  • [24] Host-specific 16S rRNA gene markers of Bacteroidales for source tracking of fecal pollution in the subtropical coastal seawater of Hong Kong
    Liu, Rulong
    Chiang, Miranda H. Y.
    Lun, Clare H. I.
    Qian, Pei-Yuan
    Lau, Stanley C. K.
    WATER RESEARCH, 2010, 44 (20) : 6164 - 6174
  • [25] Next-generation sequencing for investigating the diversity of microorganisms and pathogenic bacteria in a water source
    Ge, Yingliang
    Yu, Shuili
    TROPICAL JOURNAL OF PHARMACEUTICAL RESEARCH, 2017, 16 (07) : 1503 - 1512
  • [26] A next-generation dual-recombinase system for time- and host-specific targeting of pancreatic cancer
    Schoenhuber, Nina
    Seidler, Barbara
    Schuck, Kathleen
    Veltkamp, Christian
    Schachtler, Christina
    Zukowska, Magdalena
    Eser, Stefan
    Feyerabend, Thorsten B.
    Paul, Mariel C.
    Eser, Philipp
    Klein, Sabine
    Lowy, Andrew M.
    Banerjee, Ruby
    Yang, Fangtang
    Lee, Chang-Lung
    Moding, Everett J.
    Kirsch, David G.
    Scheideler, Angelika
    Alessi, Dario R.
    Varela, Ignacio
    Bradley, Allan
    Kind, Alexander
    Schnieke, Angelika E.
    Rodewald, Hans-Reimer
    Rad, Roland
    Schmid, Roland M.
    Schneider', Gunter
    Saur, Dieter
    NATURE MEDICINE, 2014, 20 (11) : 1340 - 1347
  • [27] A next-generation dual-recombinase system for time- and host-specific targeting of pancreatic cancer
    Nina Schönhuber
    Barbara Seidler
    Kathleen Schuck
    Christian Veltkamp
    Christina Schachtler
    Magdalena Zukowska
    Stefan Eser
    Thorsten B Feyerabend
    Mariel C Paul
    Philipp Eser
    Sabine Klein
    Andrew M Lowy
    Ruby Banerjee
    Fangtang Yang
    Chang-Lung Lee
    Everett J Moding
    David G Kirsch
    Angelika Scheideler
    Dario R Alessi
    Ignacio Varela
    Allan Bradley
    Alexander Kind
    Angelika E Schnieke
    Hans-Reimer Rodewald
    Roland Rad
    Roland M Schmid
    Günter Schneider
    Dieter Saur
    Nature Medicine, 2014, 20 : 1340 - 1347
  • [28] Genetic profiling of thymic carcinoma using targeted next-generation sequencing
    Shitara, Masayuki
    Okuda, Katsuhiro
    Suzuki, Ayumi
    Tatematsu, Tsutomu
    Hikosaka, Yu
    Moriyama, Satoru
    Sasaki, Hidefumi
    Fujii, Yoshitaka
    Yano, Motoki
    LUNG CANCER, 2014, 86 (02) : 174 - 179
  • [29] GENETIC PROFILING OF THYMIC CARCINOMA USING TARGETED NEXT-GENERATION SEQUENCING
    Shitara, Masayuki
    Okuda, Katsuhiro
    Suzuki, Ayumi
    Tatematsu, Tsutomu
    Hikosaka, Yu
    Moriyama, Satoru
    Sasaki, Hidefumi
    Yano, Motoki
    Fujii, Yoshitaka
    JOURNAL OF THORACIC ONCOLOGY, 2014, 9 (10) : S214 - S214
  • [30] ROBUST GLOBAL MICRORNA EXPRESSION PROFILING USING NEXT-GENERATION SEQUENCING TECHNOLOGIES
    Tam, Shirley
    De Borja, Richard
    Mcpherson, John D.
    Tsao, Ming-Sound
    JOURNAL OF THORACIC ONCOLOGY, 2013, 8 : S455 - S455