Predicting the Efficacy of Novel Synthetic Compounds in the Treatment of Osteosarcoma via Anti-Receptor Activator of Nuclear Factor-κB Ligand (RANKL)/Receptor Activator of Nuclear Factor-κB (RANK) Targets

被引:0
|
作者
Zhang, Wenhua [1 ]
Xu, Siping [1 ]
Liu, Peng [2 ]
Li, Xusheng [3 ]
Yu, Xinyuan [3 ]
Kang, Bing [3 ]
机构
[1] Gansu Univ Tradit Chinese Med, Gansu Univ Chinese Med, Clin Med Coll 1, Lanzhou, Gansu, Peoples R China
[2] Lanzhou Univ, Clin Coll 2, Dept Plast Surg, Lanzhou, Gansu, Peoples R China
[3] 940th Hosp Joint Logist Support Force Chinese Peop, Lanzhou, Gansu, Peoples R China
关键词
Osteosarcoma; tumor targeting agents; QSAR; GEP; drug design; HM algorithm; PATHOGENESIS; BONE; CHEMISTRY;
D O I
10.2174/0115734064287922240222115200
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Background: Osteosarcoma (OS) currently demonstrates a rising incidence, ranking as the predominant primary malignant tumor in the adolescent demographic. Notwithstanding this trend, the pharmaceutical landscape lacks therapeutic agents that deliver satisfactory efficacy against OS. Objective: This study aimed to authenticate the outcomes of prior research employing the HM and GEP algorithms, endeavoring to expedite the formulation of efficacious therapeutics for osteosarcoma. Methods: A robust quantitative constitutive relationship model was engineered to prognosticate the IC50 values of innovative synthetic compounds, harnessing the power of gene expression programming. A total of 39 natural products underwent optimization via heuristic methodologies within the CODESSA software, resulting in the establishment of a linear model. Subsequent to this phase, a mere quintet of descriptors was curated for the generation of non-linear models through gene expression programming. Results: The squared correlation coefficients and s2 values derived from the heuristics stood at 0.5516 and 0.0195, respectively. Gene expression programming yielded squared correlation coefficients and mean square errors for the training set at 0.78 and 0.0085, respectively. For the test set, these values were determined to be 0.71 and 0.0121, respectively. The s2 of the heuristics for the training set was discerned to be 0.0085. Conclusion: The analytic scrutiny of both algorithms underscores their commendable reliability in forecasting the efficacy of nascent compounds. A juxtaposition based on correlation coefficients elucidates that the GEP algorithm exhibits superior predictive prowess relative to the HM algorithm for novel synthetic compounds.
引用
收藏
页码:733 / 740
页数:8
相关论文
共 50 条
  • [21] Receptor activator of nuclear factor-κB (RANK) ligand expression:: In human multiple myeloma cells.
    Mitsiades, CS
    Mitsiades, N
    Poulaki, V
    Hayashi, T
    Hideshima, T
    Podar, K
    LeBlanc, R
    Catley, L
    Tai, YT
    Chauhan, D
    Lin, B
    Schlossman, R
    Richardson, PG
    Munshi, N
    Treon, SP
    Anderson, KC
    BLOOD, 2001, 98 (11) : 638A - 638A
  • [22] The osteoprotegerin/receptor activator of nuclear factor κB/receptor activator of nuclear factor κB ligand system in cartilage
    Komuro, H
    Olee, T
    Kühn, K
    Quach, J
    Brinson, DC
    Shikhman, A
    Valbracht, J
    Creighton-Achermann, L
    Lotz, M
    ARTHRITIS AND RHEUMATISM, 2001, 44 (12): : 2768 - 2776
  • [23] Expression of receptor activator of nuclear factor-κB ligand by B cells in response to oral bacteria
    Han, X.
    Lin, X.
    Seliger, A. R.
    Eastcott, J.
    Kawai, T.
    Taubman, M. A.
    ORAL MICROBIOLOGY AND IMMUNOLOGY, 2009, 24 (03): : 190 - 196
  • [24] Inhibition of receptor activator of nuclear factor-κB ligand (RANKL)-induced osteoclast formation by pyrroloquinoline quinine (PQQ)
    Odkhuu, Erdenezaya
    Koide, Naoki
    Haque, Abedul
    Tsolmongyn, Bilegtsaikhan
    Naiki, Yoshikazu
    Hashimoto, Shoji
    Komatsu, Takayuki
    Yoshida, Tomoaki
    Yokochi, Takashi
    IMMUNOLOGY LETTERS, 2012, 142 (1-2) : 34 - 40
  • [25] Structure-Based Discovery of Receptor Activator of Nuclear Factor-κB Ligand (RANKL)-Induced Osteoclastogenesis Inhibitors
    Rinotas, Vagelis
    Liepouri, Fotini
    Ouzouni, Maria-Dimitra
    Chalkidi, Niki
    Papaneophytou, Christos
    Lampropoulou, Mariza
    Vidali, Veroniki P.
    Kontopidis, George
    Couladouros, Elias
    Eliopoulos, Elias
    Papakyriakou, Athanasios
    Douni, Eleni
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (14)
  • [26] Evaluation of Isoflavones as Bone Resorption Inhibitors upon Interactions with Receptor Activator of Nuclear Factor-κB Ligand (RANKL)
    Zaklos-Szyda, Malgorzata
    Budryn, Grazyna
    Grzelczyk, Joanna
    Perez-Sanchez, Horacio
    Zyzelewicz, Dorota
    MOLECULES, 2020, 25 (01):
  • [27] Receptor activator of nuclear factor-?B ligand (RANKL) protects against hepatic ischemia/reperfusion injury in mice
    Sakai, Nozomu
    Van Sweringen, Heather L.
    Schuster, Rebecca
    Blanchard, John
    Burns, Justin M.
    Tevar, Amit D.
    Edwards, Michael J.
    Lentsch, Alex B.
    HEPATOLOGY, 2012, 55 (03) : 888 - 897
  • [28] Role of receptor activator of nuclear factor-κB ligand and osteoprotegerin in bone cell biology
    Lorenz C. Hofbauer
    Armin E. Heufelder
    Journal of Molecular Medicine, 2001, 79 : 243 - 253
  • [29] Plasma levels of receptor activator of nuclear factor-κB ligand and osteoprotegerin in patients with neuroblastoma
    Granchi, D
    Garaventa, A
    Amato, I
    Paolucci, P
    Baldini, N
    INTERNATIONAL JOURNAL OF CANCER, 2006, 119 (01) : 146 - 151
  • [30] Role of receptor activator of nuclear factor-κB ligand and osteoprotegerin in bone cell biology
    Hofbauer, LC
    Heufelder, AE
    JOURNAL OF MOLECULAR MEDICINE-JMM, 2001, 79 (5-6): : 243 - 253