GRAPH NEURAL REACTION DIFFUSION MODELS

被引:0
|
作者
Eliasof, Moshe [1 ]
Haber, Eldad [2 ]
Treister, Eran [3 ]
机构
[1] Univ Cambridge, Cambridge CB2 1TN, England
[2] Univ British Columbia, Vancouver, BC V6T 1Z4, Canada
[3] Ben Gurion Univ Negev, Beer Sheva, Israel
来源
SIAM JOURNAL ON SCIENTIFIC COMPUTING | 2024年 / 46卷 / 04期
关键词
graph neural networks; reaction diffusion; Turing patterns; TURING INSTABILITIES; FRAMEWORK; NETWORKS;
D O I
10.1137/23M1576700
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
The integration of graph neural networks (GNNs) and neural ordinary and partial differential equations has been extensively studied in recent years. GNN architectures powered by neural differential equations allow us to reason about their behavior, and develop GNNs with desired properties such as controlled smoothing or energy conservation. In this paper we take inspiration from Turing instabilities in a reaction diffusion (RD) system of partial differential equations, and propose a novel family of GNNs based on neural RD systems, called RDGNN. We show that our RDGNN is powerful for the modeling of various data types, from homophilic, to heterophilic, and spatiotemporal datasets. We discuss the theoretical properties of our RDGNN, its implementation, and show that it improves or offers competitive performance to state-of-the-art methods.
引用
收藏
页码:C399 / C420
页数:22
相关论文
共 50 条
  • [41] Compact Graph Neural Network Models for Node Classification
    Pasa, Luca
    Navarin, Nicolo
    Sperduti, Alessandro
    37TH ANNUAL ACM SYMPOSIUM ON APPLIED COMPUTING, 2022, : 592 - 599
  • [42] Neural SHAKE: Geometric Constraints in Graph Generative Models
    Diamond, Justin
    Lill, Markus A.
    ARTIFICIAL NEURAL NETWORKS AND MACHINE LEARNING-ICANN 2024, PT X, 2024, 15025 : 43 - 57
  • [43] Inference in Probabilistic Graphical Models by Graph Neural Networks
    Yoon, KiJung
    Liao, Renjie
    Xiong, Yuwen
    Zhang, Lisa
    Fetaya, Ethan
    Urtasun, Raquel
    Zemel, Richard
    Pitkow, Xaq
    CONFERENCE RECORD OF THE 2019 FIFTY-THIRD ASILOMAR CONFERENCE ON SIGNALS, SYSTEMS & COMPUTERS, 2019, : 868 - 875
  • [44] A Comparison of Bimolecular Reaction Models for Stochastic Reaction–Diffusion Systems
    I. C. Agbanusi
    S. A. Isaacson
    Bulletin of Mathematical Biology, 2014, 76 : 922 - 946
  • [45] Enhancing Echocardiography Quality with Diffusion Neural Models
    Fernandez-Rodriguez, Antonio
    Lopez-Rubio, Ezequiel
    Torres-Salomon, Pablo
    Rodriguez-Capitan, Jorge
    Jimenez-Navarro, Manuel
    Molina-Cabello, Miguel A.
    BIOINFORMATICS AND BIOMEDICAL ENGINEERING, PT II, IWBBIO 2024, 2024, 14849 : 169 - 181
  • [46] Neural field models with transmission delays and diffusion
    Spek, Len
    Kuznetsov, Yuri A.
    van Gils, Stephan A.
    JOURNAL OF MATHEMATICAL NEUROSCIENCE, 2020, 10 (01):
  • [47] Numerical simulation of reaction-diffusion neural dynamics models and their synchronization/desynchronization: Application to epileptic seizures
    Hemami, Mohammad
    Parand, Kourosh
    Rad, Jamal Amani
    COMPUTERS & MATHEMATICS WITH APPLICATIONS, 2019, 78 (11) : 3644 - 3677
  • [48] Shear banding in reaction-diffusion models
    Radulescu, O
    Olmsted, PD
    Lu, CYD
    RHEOLOGICA ACTA, 1999, 38 (06) : 606 - 613
  • [49] REACTION-DIFFUSION MODELS: DYNAMICS AND CONTROL
    Zuazua, Enrique
    PROCEEDINGS OF THE 6TH INTERNATIONAL CONFERENCE ON CONTROL AND OPTIMIZATION WITH INDUSTRIAL APPLICATIONS, VOL I, 2018, : 22 - 24
  • [50] Reaction diffusion models in one dimension with disorder
    Le Doussal, P
    Monthus, C
    PHYSICAL REVIEW E, 1999, 60 (02): : 1212 - 1238