Relationship between amide ratio assessed by Fourier-transform infrared spectroscopy: A biomarker candidate for polycythemia vera disease

被引:1
|
作者
Guleken, Zozan [1 ]
Aday, Aynur [2 ]
Bayrak, Ayse Gul [2 ]
Hindilerden, Ipek Yonal [3 ]
Nalcaci, Meliha [3 ]
Cebulski, Jozef [4 ]
Depciuch, Joanna [5 ]
机构
[1] Gaziantep Islam Sci & Technol Univ, Fac Med, Dept Physiol, Gaziantep, Turkiye
[2] Istanbul Univ, Fac Med, Dept Internal Med, Div Med Genet, Istanbul, Turkiye
[3] Istanbul Univ, Istanbul Fac Med, Dept Internal Med, Div Hematol, Istanbul, Turkiye
[4] Univ Rzeszow, Inst Phys, Rzeszow, Poland
[5] Inst Nucl Phys, Krakow, Poland
关键词
Fourier transform infrared (FTIR); polycythemia vera; principal component analysis (PCA); receiver operating characteristic (ROC); support vector machine (SVM); PROTEIN SECONDARY STRUCTURE; TYROSINE KINASE JAK2; ESSENTIAL THROMBOCYTHEMIA; MUTATION; MODEL; RAMAN;
D O I
10.1002/jbio.202400162
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The study utilized Fourier transform infrared (FTIR) spectroscopy coupled with chemometrics to investigate protein composition and structural changes in the blood serum of patients with polycythemia vera (PV). Principal component analysis (PCA) revealed distinct biochemical properties, highlighting elevated absorbance of phospholipids, amides, and lipids in PV patients compared to healthy controls. Ratios of amide I/amide II and amide I/amide III indicated alterations in protein structures. Support vector machine analysis and receiver operating characteristic curves identified amide I as a crucial predictor of PV, achieving 100% accuracy, sensitivity, and specificity, while amide III showed a lower predictive value (70%). PCA analysis demonstrated effective differentiation between PV patients and controls, with key wavenumbers including amide II, amide I, and CH lipid vibrations. These findings underscore the potential of FTIR spectroscopy for diagnosing and monitoring PV.
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页数:11
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