Combination therapy synergism prediction for virus treatment using machine learning models

被引:1
|
作者
Majidifar, Shayan [1 ]
Zabihian, Arash [2 ]
Hooshmand, Mohsen [1 ]
机构
[1] Inst Adv Studies Basic Sci IASBS, Dept Comp Sci & Informat Technol, Zanjan, Iran
[2] Kimia Zist Parsian Pharmaceut Co, Dept QA, Zanjan, Iran
来源
PLOS ONE | 2024年 / 19卷 / 09期
基金
美国国家科学基金会;
关键词
GENOME SEQUENCE; STONE-AGE; ARTIFACTS; CAVE; AURIGNACIAN; TURKEY;
D O I
10.1371/journal.pone.0309733
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Combining different drugs synergistically is an essential aspect of developing effective treatments. Although there is a plethora of research on computational prediction for new combination therapies, there is limited to no research on combination therapies in the treatment of viral diseases. This paper proposes AI-based models for predicting novel antiviral combinations to treat virus diseases synergistically. To do this, we assembled a comprehensive dataset comprising information on viral strains, drug compounds, and their known interactions. As far as we know, this is the first dataset and learning model on combination therapy for viruses. Our proposal includes using a random forest model, an SVM model, and a deep model to train viral combination therapy. The machine learning models showed the highest performance, and the predicted values were validated by a t-test, indicating the effectiveness of the proposed methods. One of the predicted combinations of acyclovir and ribavirin has been experimentally confirmed to have a synergistic antiviral effect against herpes simplex type-1 virus, as described in the literature.
引用
收藏
页数:16
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