The assembly process and co-occurrence network of soil microbial community driven by cadmium in volcanic ecosystem

被引:0
|
作者
Xiao, Qingchen [1 ,2 ,3 ]
Wang, Boyan [1 ,2 ,3 ]
Li, Zishan [1 ,2 ,3 ]
Zhang, Zihua [1 ,2 ,3 ]
Xie, Kailing [1 ,2 ,3 ]
Zhou, Jing [1 ,2 ,3 ]
Lin, Keqing [1 ,2 ,3 ]
Geng, Xiaowan [1 ,2 ,3 ]
Li, Xiaoyu [1 ,2 ,3 ]
Chen, Jin [1 ,2 ,3 ]
机构
[1] Anhui Agr Univ, Sch Life Sci, Hefei 230036, Peoples R China
[2] Anhui Agr Univ, Natl Engn Lab Crop Stress Resistance Breeding, Hefei 230036, Peoples R China
[3] Anhui Agr Univ, Key Lab Crop Stress Resistance & High Qual Biol An, Hefei 230036, Peoples R China
关键词
Cadmium contamination; Absolute abundance; qPCR; Functional genes; Co-occurrence networks; BACTERIAL COMMUNITIES; HEAVY-METALS; CONTAMINATION; MITIGATION; GRADIENT; IMPACTS; BASALTS; GENES; CHINA;
D O I
10.1016/j.resenv.2024.100164
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Heavy metal (HM) contamination affects the composition and structure of soil microbial communities, but there are few studies on the assembly process and co-occurrence network of soil microbial community succession driven by Cd in volcanic ecosystem. To address this gap in knowledge, we collected and analyzed soil samples from the Nvshan Volcanic area to understand the microbial characteristics in primary succession soil (PS) and secondary succession soil (SS). We found that the soil was contaminated with different levels of Cd (PS > SS), resulting in obvious heterogeneity of microorganisms. The absolute abundance of bacteria (16S rRNA gene copies) varied significantly between the two successions (P < 0.0001). The co-occurrence networks analysis showed that the number of nodes in bacterial communities was lower in PS compared to SS (1002 vs. 1004), indicating that heavy metal contamination would reduce the number of soil microbial communities. Compared with PS, bacterial communities exhibited stronger competitiveness in SS (positive: negative, P/N: 25.69 vs. 64.22), whereas fungal communities were closer symbiotic relationships (positive/negative, P/N: 15.85 vs. 14.29). The neutral community model (NCM) analysis revealed that stochastic processes predominantly governed the microbial assembly process (bacterial R-2: 0.657, fungal R-2: 0.686). The Mantel test analysis revealed that Cd was negatively associated with cbbLR, amoA, and phoD. The results of the Sankey diagram showed that fungi were more resistant than bacteria (27 vs. 13). This study contributes to understanding the process of soil microbial succession under Cd stress and identifying microbial strains with potential for Cd remediation.
引用
收藏
页数:13
相关论文
共 50 条
  • [21] Active tailings disturb the surrounding vegetation soil fungal community: Diversity, assembly process and co-occurrence patterns
    Liu, Houquan
    Yao, Jun
    Liu, Bang
    Li, Miaomiao
    Liu, Jianli
    Jiang, Shun
    Yu, Wenjing
    Zhao, Yuhui
    Duran, Robert
    SCIENCE OF THE TOTAL ENVIRONMENT, 2023, 865
  • [22] Implications of Soil Microbial Community Assembly for Ecosystem Restoration: Patterns, Process, and Potential
    Emily B. Graham
    Joseph E. Knelman
    Microbial Ecology, 2023, 85 : 809 - 819
  • [23] Implications of Soil Microbial Community Assembly for Ecosystem Restoration: Patterns, Process, and Potential
    Graham, Emily B.
    Knelman, Joseph E.
    MICROBIAL ECOLOGY, 2023, 85 (03) : 809 - 819
  • [24] The potential of magnetic biochar prepared by a solvent-free method as a soil amendment: Metal immobilization performance, soil microbial co-occurrence network and community assembly mechanism
    Li, Jiacan
    Sun, Yucan
    Fang, Mingzhi
    Guo, Zizhang
    Zhang, Bing
    Chen, Tan
    Liu, Yifei
    Yang, Ting
    Zhuang, Linlan
    JOURNAL OF ENVIRONMENTAL CHEMICAL ENGINEERING, 2024, 12 (05):
  • [25] Co-occurrence pattern and community assembly of broomcorn millet rhizosphere microbiomes in a typical agricultural ecosystem
    Tian, Lixin
    Feng, Yu
    Gao, Zhijun
    Li, Haiquan
    Wang, Bingsong
    Huang, Yan
    Gao, Xiaoli
    Feng, Baili
    APPLIED SOIL ECOLOGY, 2022, 176
  • [26] Soil depth and grassland origin cooperatively shape microbial community co-occurrence and function
    Upton, Racheal N.
    Sielaff, Aleksandra Checinska
    Hofmockel, Kirsten S.
    Xu, Xia
    Polley, H. Wayne
    Wilsey, Brian J.
    ECOSPHERE, 2020, 11 (01):
  • [27] Converting croplands to orchards changes soil microbial community composition and co-occurrence patterns
    Wang, Rui
    Wang, Ying
    Zheng, Wei
    Hou, Fangbin
    Hu, Yaxian
    Guo, Shengli
    LAND DEGRADATION & DEVELOPMENT, 2021, 32 (08) : 2509 - 2519
  • [28] Erratum: Using network analysis to explore co-occurrence patterns in soil microbial communities
    Albert Barberán
    Scott T Bates
    Emilio O Casamayor
    Noah Fierer
    The ISME Journal, 2014, 8 : 952 - 952
  • [29] Microbial community structure, co-occurrence network and fermentation characteristics of woody plant silage
    Du, Zhumei
    Lin, Yanli
    Sun, Lin
    Yang, Fuyu
    Cai, Yimin
    JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, 2022, 102 (03) : 1193 - 1204
  • [30] Spatiotemporal dynamics of the archaeal community in coastal sediments: assembly process and co-occurrence relationship
    Liu, Jiwen
    Zhu, Shangqing
    Liu, Xiaoyue
    Yao, Peng
    Ge, Tiantian
    Zhang, Xiao-Hua
    ISME JOURNAL, 2020, 14 (06): : 1463 - 1478