Q&A: Methods for estimating genetic gain in sub-Saharan Africa and achieving improved gains

被引:1
|
作者
Dieng, Ibnou [1 ]
Gardunia, Brian [2 ]
Covarrubias-Pazaran, Giovanny [3 ]
Gemenet, Dorcus C. [4 ]
Trognitz, Bodo [5 ]
Ofodile, Sam [1 ]
Fowobaje, Kayode [1 ]
Ntukidem, Solomon [1 ]
Shah, Trushar [6 ]
Imoro, Simon [1 ]
Tripathi, Leena [6 ]
Mushoriwa, Hapson [1 ]
Mbabazi, Ruth [2 ]
Salvo, Stella [2 ]
Derera, John [1 ]
机构
[1] Int Inst Trop Agr IITA, Oyo Rd,PMB 5320, Ibadan, Nigeria
[2] Bayer Crop Sci, Chesterfield, MO 63017 USA
[3] Int Maize & Wheat improvement Ctr CIMMYT, Excellence Breeding EiB, Texcoco, Mexico
[4] EiB CIMMYT, ICRAF House United Nations Ave, Nairobi, Kenya
[5] EiB CIMMYT IITA, Ibadan, Nigeria
[6] IITA Int Livestock Res Inst ILRI, Nairobi, Kenya
来源
PLANT GENOME | 2024年 / 17卷 / 02期
基金
比尔及梅琳达.盖茨基金会;
关键词
LONG-TERM; WHEAT YIELD; PREDICTION; INFORMATION; TRENDS; TRIALS;
D O I
10.1002/tpg2.20471
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Regular measurement of realized genetic gain allows plant breeders to assess and review the effectiveness of their strategies, allocate resources efficiently, and make informed decisions throughout the breeding process. Realized genetic gain estimation requires separating genetic trends from nongenetic trends using the linear mixed model (LMM) on historical multi-environment trial data. The LMM, accounting for the year effect, experimental designs, and heterogeneous residual variances, estimates best linear unbiased estimators of genotypes and regresses them on their years of origin. An illustrative example of estimating realized genetic gain was provided by analyzing historical data on fresh cassava (Manihot esculenta Crantz) yield in West Africa (). This approach can serve as a model applicable to other crops and regions. Modernization of breeding programs is necessary to maximize the rate of genetic gain. This can be achieved by adopting genomics to enable faster breeding, accurate selection, and improved traits through genomic selection and gene editing. Tracking operational costs, establishing robust, digitalized data management and analytics systems, and developing effective varietal selection processes based on customer insights are also crucial for success. Capacity building and collaboration of breeding programs and institutions also play a significant role in accelerating genetic gains. Annual genetic gain assessment drives breeding progress and efficiency. Realized genetic gain is preferably estimated using historical data with at least two long-term checks. Realized genetic gain is estimated using the genotypes best linear unbiased estimators from the linear mixed model, regressed on their years of origin. State-of-the-art breeding techniques, especially genomic selection, improve genetic gains. Global hunger is a growing problem. Plant breeding can help produce better crops and higher yields. Monitoring breeding programs' successes by estimating genetic trends is therefore essential. Different methods of genetic trend estimation exist. To figure out how much genotypes have improved over time, we recommend a statistical model that looks at the genetic information of the plants. The model analyzes how the genotypes' performances relate to the years they were developed. This helps estimate the actual improvement in the genotypes over different years. Regular measurement of genetic trends allows plant breeders to assess and review the effectiveness of their strategies, allocate resources efficiently, and make informed decisions throughout the breeding process. However, genetic progress is improved by adopting genomics and other methods to enable faster breeding, accurate selection, and improved traits through genomic selection and gene editing.
引用
收藏
页数:16
相关论文
共 50 条
  • [21] Estimating male circumcision coverage in 15 priority countries in sub-Saharan Africa
    Stegman, Peter M.
    Yee, Randy
    Davis, Joshua
    Tchuenche, Michel
    Linder, Rachael
    Zembe, Lycias
    Frescura, Luisa
    Kripke, Katharine E.
    JOURNAL OF THE INTERNATIONAL AIDS SOCIETY, 2021, 24
  • [22] Estimating the impact of farmer field schools in sub-Saharan Africa: the case of cocoa
    Tsiboe, Francis
    Dixon, Bruce L.
    Nalley, Lawton L.
    Popp, Jennie S.
    Luckstead, Jeff
    AGRICULTURAL ECONOMICS, 2016, 47 (03) : 329 - 339
  • [23] Methodological Challenges in Estimating Trends and Burden of Cardiovascular Disease in Sub-Saharan Africa
    Kariuki, Jacob K.
    Stuart-Shor, Eileen M.
    Leveille, Suzanne G.
    Hayman, Laura L.
    CARDIOLOGY RESEARCH AND PRACTICE, 2015, 2015
  • [24] Estimating nutrition-income elasticities in sub-Saharan Africa: implications on health
    Ogundari, Kolawole
    Ito, Shoichi
    Okoruwa, Victor O.
    JOURNAL OF ECONOMIC STUDIES, 2016, 43 (01) : 59 - 69
  • [25] Heterogeneous genetic architectures of prostate cancer susceptibility in sub-Saharan Africa
    Janivara, Rohini
    Chen, Wenlong C.
    Hazra, Ujani
    Baichoo, Shakuntala
    Agalliu, Ilir
    Kachambwa, Paidamoyo
    Simonti, Corrine N.
    Brown, Lyda M.
    Tambe, Saanika P.
    Kim, Michelle S.
    Harlemon, Maxine
    Jalloh, Mohamed
    Muzondiwa, Dillon
    Naidoo, Daphne
    Ajayi, Olabode O.
    Snyper, Nana Yaa
    Niang, Lamine
    Diop, Halimatou
    Ndoye, Medina
    Mensah, James E.
    Abrahams, Afua O. D.
    Biritwum, Richard
    Adjei, Andrew A.
    Adebiyi, Akindele O.
    Shittu, Olayiwola
    Ogunbiyi, Olufemi
    Adebayo, Sikiru
    Nwegbu, Maxwell M.
    Ajibola, Hafees O.
    Oluwole, Olabode P.
    Jamda, Mustapha A.
    Pentz, Audrey
    Haiman, Christopher A.
    Spies, Petrus V.
    van der Merwe, Andre
    Cook, Michael B.
    Chanock, Stephen J.
    Berndt, Sonja I.
    Watya, Stephen
    Lubwama, Alexander
    Muchengeti, Mazvita
    Doherty, Sean
    Smyth, Natalie
    Lounsbury, David
    Fortier, Brian
    Rohan, Thomas E.
    Jacobson, Judith S.
    Neugut, Alfred I.
    Hsing, Ann W.
    Gusev, Alexander
    NATURE GENETICS, 2024, 56 (10) : 2093 - 2103
  • [26] Psychosocial assessment methods in childhood epilepsy: Focus on sub-Saharan Africa
    Famuyiwa, OO
    Ogunmekan, O
    JOURNAL OF THE ROYAL SOCIETY OF HEALTH, 1997, 117 (02): : 110 - 114
  • [27] Obstetric hemorrhage: effective methods for addressing the menace in Sub-Saharan Africa
    Abdullahi, Hauwa Musa
    Aliyu, Labaran Dayyabu
    Yusuf, Murtala
    Miko, Mustapha Abdullahi
    JOURNAL OF PERINATAL MEDICINE, 2022, 50 (09) : 1157 - 1162
  • [28] Methods of Privatization of State Enterprises in Sub-Saharan Africa: A theoretical analysis
    Founanou, Mathurin
    REVUE D ECONOMIE POLITIQUE, 2009, 119 (06): : 921 - 943
  • [29] Achieving teaching quality in sub-Saharan Africa: empirical results from cascade training
    Duong, Hang B.
    COMPARE-A JOURNAL OF COMPARATIVE AND INTERNATIONAL EDUCATION, 2017, 47 (04) : 624 - 626
  • [30] Achieving schooling for all: Budgetary expenditures on education in sub-Saharan Africa and South Asia
    Colclough, C
    Al-Samarrai, S
    WORLD DEVELOPMENT, 2000, 28 (11) : 1927 - 1944