Assessment of genome mutation analysis for tumor-informed detection of circulating tumor DNA in patients with breast cancer

被引:0
|
作者
Wahab, Mugip Rahaman Abdul [1 ]
Palaniyandi, Thirunavukkarasu [1 ,2 ,3 ]
Thamada, Swarnakala [4 ]
Viswanathan, Sandhiya [1 ]
Baskar, Gomathy [1 ]
Surendran, Hemapreethi [1 ]
Baraneedharan, P. [5 ]
Kannan, J. [6 ]
Ravi, Maddaly [7 ]
Rajinikanth, Suba [8 ]
El-Tayeb, Mohamed A. [9 ]
Syed, Shaban [9 ]
机构
[1] Dr MGR Educ & Res Inst, Dept Biotechnol, Chennai 600095, India
[2] Saveetha Univ, Saveetha Dent Coll & Hosp, Dept Anat, Biomed Res Unit,SIMATS, Chennai 602105, India
[3] Saveetha Univ, Saveetha Dent Coll & Hosp, Lab Anim Ctr, SIMATS, Chennai 602105, India
[4] Zool Survey India, Andaman & Nicobar Reg Ctr, Mol Systemat Lab, Port Blair 744102, Andaman & Nicob, India
[5] Saveetha Engn Coll, Ctr Photon & Nanotechnol Res, Elect & Commun Engn, Chennai 602105, India
[6] RGGGH, Madras Med Coll, Dept Med Oncol, Chennai 600003, Tamil Nadu, India
[7] Sri Ramachandra Inst Higher Educ & Res, Dept Human Genet, Chennai 600116, Tamil Nadu, India
[8] Sri Lalithambigai Med Coll & Hosp, Dr MGR Educ & Res Inst, Dept Paediat, Chennai 600095, Tamil Nadu, India
[9] King Saud Univ, Coll Sci, Dept Bot & Microbiol, Riyadh 11451, Saudi Arabia
关键词
Breast cancer; Liquid biopsy; Circulating tumor DNA; PCR; Breast cancer genes; Sanger sequencing; Gene mutations;
D O I
10.1016/j.cca.2024.119818
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Introduction: Breast cancer, one of the most aggressive types of cancer, poses significant challenges for diagnosis and treatment. Emerging as a promising biomarker, circulating tumor DNA (ctDNA) can be used to identify and monitor disease risk. This study sought to examine the impact of mutations in various genes on the progression of breast cancer. Genetic variants associated with breast cancer have been examined in individuals diagnosed with the disease worldwide. Methods: Fifty female participants underwent breast cancer testing. Sanger sequencing was used to analyze peripheral blood DNA from these individuals to detect disease-causing mutations in the BRCA1, BRCA2, PTEN, TP53, and ATM genes. Genetic alterations linked to breast cancer were screened and the findings were compared with those of tumor genes. Results: The development of hereditary/early onset breast cancer in this study was significantly associated with mutations in ATM, PTEN, TP53, and BRCA1/BRCA2, according to the analysis of sequencing data. Conclusion: This study demonstrates the feasibility of analyzing ctDNA in patients with breast cancer (BC) undergoing palliative treatment using an SS-based technique.
引用
收藏
页数:11
相关论文
共 50 条
  • [41] Feasibility of tumor informed circulating tumor DNA in neoadjuvant rectal cancer
    Malla, M.
    Bridges, C.
    Jurdi, A.
    Liu, M.
    Goldberg, R.
    ANNALS OF ONCOLOGY, 2023, 34 : S56 - S56
  • [42] Circulating tumor DNA and circulating tumor cells in metastatic triple negative breast cancer patients
    Bidard, Francois-Clement
    Madic, Jordan
    Kiialainen, Anna
    Birzele, Fabian
    Ramey, Guillemette
    Leroy, Quentin
    Frio, Thomas Rio
    Raynal, Virginie
    Bernard, Virginie
    Lermine, Alban
    Clausen, Inga
    Giroud, Nicolas
    Schmucki, Roland
    Horn, Carsten
    Spleiss, Olivia
    Lantz, Olivier
    Stern, Marc-Henri
    Weisser, Martin
    Lebofsky, Ronald
    Pierga, Jean-Yves
    CANCER RESEARCH, 2015, 75
  • [43] Circulating tumor DNA and circulating tumor cells in metastatic triple negative breast cancer patients
    Madic, Jordan
    Kiialainen, Anna
    Bidard, Francois-Clement
    Birzele, Fabian
    Ramey, Guillemette
    Leroy, Quentin
    Frio, Thomas Rio
    Vaucher, Isabelle
    Raynal, Virginie
    Bernard, Virginie
    Lermine, Alban
    Clausen, Inga
    Giroud, Nicolas
    Schmucki, Roland
    Milder, Maud
    Horn, Carsten
    Spleiss, Olivia
    Lantz, Olivier
    Stern, Marc-Henri
    Pierga, Jean-Yves
    Weisser, Martin
    Lebofsky, Ronald
    INTERNATIONAL JOURNAL OF CANCER, 2015, 136 (09) : 2158 - 2165
  • [44] Detection of circulating tumor DNA without a tumor-informed search using next-generation sequencing is a prognostic biomarker in pancreatic ductal adenocarcinoma
    Affolter, Kajsa E.
    Hellwig, Sabine
    Nix, David A.
    Bronner, Mary P.
    Thomas, Alun
    Fuertes, Carrie L.
    Hamil, Cindy L.
    Garrido-Laguna, Ignacio
    Scaife, Courtney L.
    Mulvihill, Sean J.
    Underhill, Hunter R.
    NEOPLASIA, 2021, 23 (09): : 859 - 869
  • [45] Beyond basics: Key mutation selection features for successful tumor-informed ctDNA detection
    Nesic, Marijana
    Rasmussen, Mads H.
    Henriksen, Tenna V.
    Demuth, Christina
    Frydendahl, Amanda
    Nordentoft, Iver
    Dyrskjot, Lars
    Andersen, Claus L.
    INTERNATIONAL JOURNAL OF CANCER, 2024, 155 (05) : 925 - 933
  • [46] Mutation analysis of circulating tumor DNA and paired ascites and tumor tissues in ovarian cancer
    Jie, Xiaoxiang
    Du, Ming
    Zhang, Meng
    Jin, Xiayu
    Cai, Qingqing
    Xu, Congjian
    Zhang, Xiaoyan
    EXPERIMENTAL AND THERAPEUTIC MEDICINE, 2022, 24 (03)
  • [47] Circulating tumor cells detection in tumor draining vein of breast cancer patients
    Masaya Hattori
    Hayao Nakanishi
    Mayumi Yoshimura
    Madoka Iwase
    Akiyo Yoshimura
    Yayoi Adachi
    Naomi Gondo
    Haruru Kotani
    Masataka Sawaki
    Nao Fujita
    Yasushi Yatabe
    Hiroji Iwata
    Scientific Reports, 9
  • [48] Circulating tumor cells detection in tumor draining vein of breast cancer patients
    Hattori, Masaya
    Nakanishi, Hayao
    Yoshimura, Mayumi
    Iwase, Madoka
    Yoshimura, Akiyo
    Adachi, Yayoi
    Gondo, Naomi
    Kotani, Haruru
    Sawaki, Masataka
    Fujita, Nao
    Yatabe, Yasushi
    Iwata, Hiroji
    SCIENTIFIC REPORTS, 2019, 9 (1)
  • [49] Identifying Circulating Tumor DNA Mutation Profiles in Metastatic Breast Cancer Patients with Multiline Resistance
    Hu, Zhe-Yu
    Xie, Ning
    Tian, Can
    Yang, Xiaohong
    Liu, Liping
    Li, Jing
    Xiao, Huawu
    Wu, Hui
    Lu, Jun
    Gao, Jianxiang
    Hu, Xuming
    Cao, Min
    Shui, Zhengrong
    Xiao, Mengjia
    Tang, Yu
    He, Qiongzhi
    Chang, Lianpeng
    Xia, Xuefeng
    Yi, Xin
    Liao, Qianjin
    Ouyang, Quchang
    EBIOMEDICINE, 2018, 32 : 111 - 118
  • [50] Knowledge of Challenging Tumor Types When Ordering Tumor-Informed Circulating Tumor DNA Testing Can Facilitate Appropriate Use of This Testing
    Scozzaro, K.
    Hawley, M.
    Emery, M.
    Reuther, J.
    Zhao, J.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2023, 25 (11): : S114 - S114