Pannonibacter tanglangensis sp. nov., a New Species Isolated from Pond Sediment

被引:0
|
作者
Wang, Lei [1 ]
Cheng, Yanpeng [2 ]
Yang, Panpan [1 ,3 ]
Zhang, Jinjin [4 ]
Zhang, Gui [5 ]
Zhang, Sihui [6 ,7 ]
Yang, Jing [8 ,9 ]
Zhang, Zhen [2 ]
Hu, Lulu [1 ]
Pu, Ji [8 ]
Yang, Yanying [10 ]
Lai, Xin-He [11 ]
Xu, Jianguo [6 ,7 ,8 ,9 ]
Li, Yinghui [1 ]
Hu, Qinghua [1 ]
机构
[1] Shenzhen Ctr Dis Control & Prevent, Microbiol Lab, Shenzhen 518000, Peoples R China
[2] Shenzhen Ctr Dis Control & Prevent, Div Communicable Dis Control & Prevent, Shenzhen 518000, Peoples R China
[3] Shanxi Med Univ, Sch Publ Hlth, Taiyuan 030001, Peoples R China
[4] Futian Dist Ctr Dis Control & Prevent, Div Qual & Management, Shenzhen 518000, Peoples R China
[5] Shandong First Med Univ, Infect Management Off, Shandong Prov Hosp, Jinan 250021, Peoples R China
[6] Peking Univ, Dept Lab Sci & Technol, Beijing 100191, Peoples R China
[7] Peking Univ, Vaccine Res Ctr, Sch Publ Hlth, Beijing 100191, Peoples R China
[8] Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
[9] Chinese Acad Med Sci, Res Units Discovery Unknown Bacteria & Funct, Beijing 102206, Peoples R China
[10] Qinghai Inst Endem Dis Prevent & Control, Dept Endem Dis Prevent & Control, Xining 810000, Peoples R China
[11] Shenzhen Boya Gene Technol Co Ltd, Shenzhen 518107, Peoples R China
关键词
New species; Pannonibacter; Pannonibacter tanglangensis sp. nov; IDENTIFICATION; GENE; PHRAGMITETUS; DATABASE; TREES; BASE;
D O I
10.1007/s12275-024-00151-y
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two bacterial strains (XCT-34(T) and XCT-53) isolated from sediment samples of an artificial freshwater reservoir were analyzed using a polyphasic approach. The two isolates are aerobic, Gram-stain-negative, oxidase-negative, catalase-positive, motile with polar flagella, rod-shaped, and approximately 1.4-3.4 x 0.4-0.9 mu m in size. Phylogenetic analyses based on 16S rRNA gene and whole-genome sequences showed that the two strains formed a distinct branch within the evolutionary radiation of the genus Pannonibacter, closest to Pannonibacter carbonis Q4.6(T) (KCTC 52466). Furthermore, lower than threshold average nucleotide identity values (ANI, 85.7-86.4%) and digital DNA-DNA hybridization values (dDDH, 22.3-30.5%) of the two strains compared to the nearest type strains also confirmed that they represented a novel species. Genomic analyses, including annotation of the KEGG pathways, prediction of the secondary metabolism biosynthetic gene clusters and PHI phenotypes, supported functional inference and differentiation of the strains from the closely related taxa. Results of chemotaxonomic and physiological studies revealed that their distinct phenotypic characteristics distinguished them from existing Pannonibacter species. Thus, the two strains are considered to represent a novel species of Pannonibacter, for which the name of Pannonibacter tanglangensis sp. nov. is proposed, with XCT-34(T) (= KCTC 82332(T) = GDMCC 1.1947(T)) as the respective type strain.
引用
收藏
页码:727 / 737
页数:11
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