Genome- based reclassification of Salipiger manganoxidans (Rajasabapathy et al. 2016) Wirth et al. 2018 as a later heterotypic synonym of Salipiger marinus (Lai et al. 2011) Wirth et al. 2018

被引:0
|
作者
Yang, Yuxue [1 ]
Ni, Keqing [1 ]
Wang, Di [1 ]
Wu, Xinlei [1 ]
Wei, Yuli [1 ,2 ]
机构
[1] Shanghai Ocean Univ, Coll Oceanog & Ecol Sci, Shanghai 201306, Peoples R China
[2] Marine Biomed Sci & Technol Innovat Platform Linga, Shanghai 201306, Peoples R China
基金
中国国家自然科学基金;
关键词
genome; based reclassification; heterotypic synonym; Salipiger marinus; Salipiger manganoxidans; SP NOV; GEN; NOV; BACTERIUM; STANDARD;
D O I
10.1099/ijsem.0.006329
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Salipiger manganoxidans VSW210T was compared with Salipiger marinus CK-I3-6T to examine the taxonomic relationship between the two type strains. In phylogenetic trees drawn using whole genome sequences and 16S rRNA gene sequences, S. manganoxidans VSW210T and S. marinus CK-I3-6T clade together and showed a 99.6 % 16S rRNA sequence similarity. The average amino acid identity (AAI), average nucleotide identity (ANIb and ANIm) and digital DNA-DNA hybridization (dDDH) values between S. manganoxidans VSW210T and S. marinus CK-I3-6T were below 97.5, 97.4, 98.4 and 85.1 +/- 2.5 %, respectively, all of which were greater than the species delineation threshold AAI value (95.5 %), ANI value (95-96 %) and dDDH value (70 %). Most phenotypic features between both species were almost identical, although there were some differences. The present results show that Salipiger manganoxidans is a later heterotypic synonym of Salipiger marinus.
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