What we can learn from deep space communication for reproducible bioimaging and data analysis

被引:0
|
作者
Woller, Tatiana [1 ,2 ]
Cawthorne, Christopher J. [3 ]
Slootmaekers, Romain Raymond Agnes [4 ]
Roig, Ingrid Barcena [5 ]
Botzki, Alexander [6 ]
Munck, Sebastian [2 ,7 ]
机构
[1] VIB Technol Training Data Core & VIB BioImaging Co, Ghent, Belgium
[2] Katholieke Univ Leuven, Dept Neurosci, Leuven, Belgium
[3] Katholieke Univ Leuven, Dept Imaging & Pathol, Nucl Med & Mol Imaging, Leuven, Belgium
[4] NSANGA, 36 Pakenstr, B-3001 Leuven, Belgium
[5] Katholieke Univ Leuven, Support Res Data Management RDM, Leuven, Belgium
[6] VIB Technol Training, Ghent, Belgium
[7] VIB Bioimaging Core, Leuven, Belgium
关键词
D O I
10.1038/s44320-023-00002-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Multiple initiatives have attempted to define and recommend the annotation of images with metadata. However, proper documentation of complex and evolving projects is a difficult task, and the variety of storage methods-electronic labnotebooks, metadata servers, repositories and manuscripts-along with data from different time points of a given project leads to either redundancy in annotation or omissions. In this Commentary, we discuss how to tackle this problem, taking inspiration from space communication which uses error-correction protocols based on redundancy for data transmission. We provide a proof of concept using an Artificial Intelligence (AI) language model to digest redundant metadata entries of this manuscript and visualize the differences to complete metadata entries, highlight inconsistencies and correct human error to improve the documentation for more reproducibility and reusability. This Commentary takes inspiration from space communication which uses error-correction protocols based on redundant data sources and discusses how we can use AI-based language models to improve documentation and reproducibility in bioimaging.
引用
收藏
页码:1 / 5
页数:5
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