Heme-based dioxygenases: Structure, function and dynamics

被引:0
|
作者
Geeraerts, Zachary [1 ]
Ishigami, Izumi [1 ]
Gao, Yuan [1 ]
Yeh, Syun-Ru [1 ]
机构
[1] Albert Einstein Coll Med, Dept Biochem, Bronx, NY 10461 USA
基金
美国国家卫生研究院;
关键词
Heme-based dioxygenase; Tryptophan dioxygenase; Indoleamine; 2; 3; dioxygenase; Resonance Raman spectroscopy; X-ray crystallography; Heme oxygen chemistry; HUMAN INDOLEAMINE 2,3-DIOXYGENASE; HUMAN TRYPTOPHAN DIOXYGENASE; TUMORAL IMMUNE RESISTANCE; KYNURENINE PATHWAY; REACTION-MECHANISM; CANCER-IMMUNOTHERAPY; SUBSTRATE-BINDING; DENDRITIC CELLS; QUINOLINIC ACID; MOLECULAR-BASIS;
D O I
10.1016/j.jinorgbio.2024.112707
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Tryptophan dioxygenase (TDO) and indoleamine 2,3 dioxygenase (IDO) belong to a unique class of heme-based enzymes that insert dioxygen into the essential amino acid, L-tryptophan (Trp), to generate N-formylkynurenine (NFK), a critical metabolite in the kynurenine pathway. Recently, the two dioxygenases were recognized as pivotal cancer immunotherapeutic drug targets, which triggered a great deal of drug discovery targeting them. The advancement of the field is however hampered by the poor understanding of the structural properties of the two enzymes and the mechanisms by which the structures dictate their functions. In this review, we summarize recent findings centered on the structure, function, and dynamics of the human isoforms of the two enzymes.
引用
收藏
页数:11
相关论文
共 50 条
  • [31] Heme-based nitrite reductase activity of glycated hemoglobin
    Robles, Damon M.
    Saw, Kay T.
    Kinfu, Yadiel
    Esquerra, Raymond M.
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2010, 239
  • [32] Catalytic enhancement of the heme-based oxygen-sensing phosphodiesterase EcDOS by hydrogen sulfide is caused by changes in heme coordination structure
    Yan, Fang
    Fojtikova, Veronika
    Man, Petr
    Stranava, Martin
    Martinkova, Marketa
    Du, Yongming
    Huang, Dongyang
    Shimizu, Toru
    [J]. BIOMETALS, 2015, 28 (04) : 637 - 652
  • [33] Catalytic enhancement of the heme-based oxygen-sensing phosphodiesterase EcDOS by hydrogen sulfide is caused by changes in heme coordination structure
    Fang Yan
    Veronika Fojtikova
    Petr Man
    Martin Stranava
    Markéta Martínková
    Yongming Du
    Dongyang Huang
    Toru Shimizu
    [J]. BioMetals, 2015, 28 : 637 - 652
  • [34] Structural and functional characterization of new heme-based sensors proteins
    Silva, M. A.
    Catarino, T.
    Salgueiro, C. A.
    [J]. FEBS JOURNAL, 2011, 278 : 130 - 130
  • [35] Novel heme-based oxygen sensor with a revealing evolutionary history
    Moskvin, Oleg V.
    Kaplan, Samuel
    Gilles-Gonzalez, Marie-Alda
    Gomelsky, Mark
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (39) : 28740 - 28748
  • [36] CRYSTAL STRUCTURE OF SENSOR DOMAIN OF HEME-BASED OXYGEN SENSOR FIXL FROM RHIZOBIUM MELILOTI
    Miyatake, H.
    Adachi, S.
    Nakamura, H.
    Tamura, K.
    Iizuka, T.
    Shiro, Y.
    Kanai, M.
    Tsuchiya, T.
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 1999, 55 : 31 - 32
  • [37] Drug discovery targeting heme-based sensors and their coupled activities
    Silva Sousa, Eduardo Henrique
    de Franca Lopes, Luiz Gonzaga
    Gonzalez, Gonzalo
    Gilles-Gonzalez, Marie-Alda
    [J]. JOURNAL OF INORGANIC BIOCHEMISTRY, 2017, 167 : 12 - 20
  • [38] Dynamic processes in the heme-based transcription factors CooA and DNR
    Liebl, U.
    Bouzhir-Sima, L.
    Lobato, L.
    Lambry, J. -C.
    Vos, M. H.
    [J]. FEBS JOURNAL, 2014, 281 : 656 - 657
  • [39] Enzyme Reactivation by Hydrogen Peroxide in Heme-based Tryptophan Dioxygenase
    Fu, Rong
    Gupta, Rupal
    Geng, Jiafeng
    Dornevil, Kednerlin
    Wang, Siming
    Zhang, Yong
    Hendrich, Michael P.
    Liu, Aimin
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (30) : 26541 - 26554
  • [40] A Heme-based Redox Sensor in the Methanogenic Archaeon Methanosarcina acetivorans
    Molitor, Bastian
    Stassen, Marc
    Modi, Anuja
    El-Mashtoly, Samir F.
    Laurich, Christoph
    Lubitz, Wolfgang
    Dawson, John H.
    Rother, Michael
    Frankenberg-Dinkel, Nicole
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (25) : 18458 - 18472