Heme-based dioxygenases: Structure, function and dynamics

被引:0
|
作者
Geeraerts, Zachary [1 ]
Ishigami, Izumi [1 ]
Gao, Yuan [1 ]
Yeh, Syun-Ru [1 ]
机构
[1] Albert Einstein Coll Med, Dept Biochem, Bronx, NY 10461 USA
基金
美国国家卫生研究院;
关键词
Heme-based dioxygenase; Tryptophan dioxygenase; Indoleamine; 2; 3; dioxygenase; Resonance Raman spectroscopy; X-ray crystallography; Heme oxygen chemistry; HUMAN INDOLEAMINE 2,3-DIOXYGENASE; HUMAN TRYPTOPHAN DIOXYGENASE; TUMORAL IMMUNE RESISTANCE; KYNURENINE PATHWAY; REACTION-MECHANISM; CANCER-IMMUNOTHERAPY; SUBSTRATE-BINDING; DENDRITIC CELLS; QUINOLINIC ACID; MOLECULAR-BASIS;
D O I
10.1016/j.jinorgbio.2024.112707
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Tryptophan dioxygenase (TDO) and indoleamine 2,3 dioxygenase (IDO) belong to a unique class of heme-based enzymes that insert dioxygen into the essential amino acid, L-tryptophan (Trp), to generate N-formylkynurenine (NFK), a critical metabolite in the kynurenine pathway. Recently, the two dioxygenases were recognized as pivotal cancer immunotherapeutic drug targets, which triggered a great deal of drug discovery targeting them. The advancement of the field is however hampered by the poor understanding of the structural properties of the two enzymes and the mechanisms by which the structures dictate their functions. In this review, we summarize recent findings centered on the structure, function, and dynamics of the human isoforms of the two enzymes.
引用
收藏
页数:11
相关论文
共 50 条
  • [1] Ferryl Intermediates in Heme-Based Dioxygenases
    Yeh, Syun-Ru
    Lewis-Ballester, Ariel
    Batabyal, Dipanwita
    Egawa, Tsuyoshi
    Lu, Changyuan
    Lin, Yu
    Marti, Marcelo A.
    Capece, Luciana
    Estrin, Dario A.
    [J]. BIOPHYSICAL JOURNAL, 2010, 98 (03) : 640A - 640A
  • [2] Reaction Mechanism of Heme-Based Dioxygenases
    Lewis-Ballester, Ariel
    Batabyal, Dipanwita
    Egawa, Tsuyoshi
    Lu, Changyuan
    Lin, Yu
    Capece, Luciana
    Marti, Marcelo
    Estrin, Dario
    Yeh, Syun-Ru
    [J]. BIOPHYSICAL JOURNAL, 2011, 100 (03) : 221 - 221
  • [3] Conformational Plasticity in Human Heme-Based Dioxygenases
    Pham, Khoa N.
    Lewis-Ballester, Ariel
    Yeh, Syun-Ru
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2021, 143 (04) : 1836 - 1845
  • [4] Heme-based oxygen sensor protein FixL: its structure and function
    Shiro, Y
    Nakamura, H
    [J]. OXYGEN AND LIFE: OXYGENASES, OXIDASE AND LIPID MEDIATORS, 2002, 1233 : 251 - 257
  • [5] Kinetic and spectroscopic studies of the heme-based O-2 sensor, FixL: Structure-function relationships in the heme-based regulation of nitrogen fixation
    Rodgers, KR
    Lukat, GS
    Barron, JA
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1996, 212 : 332 - INOR
  • [6] A HEME-BASED SENSOR OF OXYGEN
    GILLESGONZALEZ, MA
    GONZALEZ, G
    PERUTZ, MF
    [J]. JOURNAL OF CELLULAR BIOCHEMISTRY, 1995, : 236 - 236
  • [7] Heme-based oxygen gasoreceptors
    Anbalagan, Savani
    [J]. AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM, 2024, 326 (02): : E178 - E181
  • [8] Structure and Reaction Mechanism in the Heme Dioxygenases
    Efimov, Igor
    Basran, Jaswir
    Thackray, Sarah J.
    Handa, Sandeep
    Mowat, Christopher G.
    Raven, Emma Lloyd
    [J]. BIOCHEMISTRY, 2011, 50 (14) : 2717 - 2724
  • [9] The Heme-Based Oxygen-Sensor Phosphodiesterase Ec DOS (DosP): Structure-Function Relationships
    Shimizu, Toru
    [J]. BIOSENSORS-BASEL, 2013, 3 (02): : 211 - 237
  • [10] Heme-based sensors in biological systems
    Rodgers, KR
    [J]. CURRENT OPINION IN CHEMICAL BIOLOGY, 1999, 3 (02) : 158 - 167