Crystal Structure of 2-(Ethoxymethylene)Malononitrile, Hirshfeld Surface Analysis and DFT Evaluation of the Non-covalent Interactions Energy

被引:0
|
作者
Grinev, Vyacheslav S. [1 ,2 ]
Demeshko, Ilya A. [1 ]
Sklyar, Anna E. [1 ]
Dmitriev, Maksim V. [3 ]
Yegorova, Alevtina Yu. [1 ]
机构
[1] Natl Res Saratov State Univ, Inst Chem, Saratov 410012, Russia
[2] Russian Acad Sci, Inst Biochem & Physiol Plants & Microorganisms, Saratov Sci Ctr, 13 Prospekt Entuziastov, Saratov 410049, Russia
[3] Perm State Natl Res Univ, 15 Ulitsa Bukireva, Perm 614068, Russia
基金
俄罗斯科学基金会;
关键词
Crystal Structure; Disorder; Non-covalent interactions; Quantum chemical modeling; Interaction energy evaluating; 2-(Ethoxymethylene)Malononitrile; THERMOCHEMICAL KINETICS; DENSITY; DERIVATIVES;
D O I
10.1007/s10870-024-01019-0
中图分类号
O7 [晶体学];
学科分类号
0702 ; 070205 ; 0703 ; 080501 ;
摘要
The presented study describe the crystal structure of 2-(Ethoxymethylene)malononitrile (1), C6H6N2O, in the monoclinic space group P2(1)/m with Z = 2, a = 6.798(3), b = 6.172(3), c = 8.844(5) & Aring;. The unit cell of a single crystal of 1 contains two antiparallel oriented molecules. Ethyl fragment demonstrates a disorder with equal occupancy values of 0.5 and a total site-occupation factor (s.o.f.) of 1.0. The molecules of 1 are linked into infinite chains of co-oriented molecules parallel to the a axis via N-H<middle dot><middle dot><middle dot>N equivalent to C close contacts with the distance of 2.494(3) & Aring;. There are also weak hydrogen bonds > O<middle dot><middle dot><middle dot>H- between the oxygen atom and the ethyl moiety. The estimation of the energy of non-covalent interactions was conducted by DFT method with different functionals. The best reproducibility of the geometric parameters of those interactions was obtained by using M06-2X functional. The estimated energy value was found to be - 1.20 kcal/mol. [GRAPHICS] .
引用
收藏
页码:253 / 260
页数:8
相关论文
共 50 条
  • [31] Crystal structure, Hirshfeld surface analysis and interaction energy and DFT studies of 2-(2,3-dihydro-1H-perimidin-2-yl)-6-methoxyphenol
    Daouda, Ballo
    Tuo, Nanou Tieba
    Hokelek, Tuncer
    Jean-Baptiste, Kangah Niameke
    Guillaume, Kodjo Charles
    Claude, Kablan Ahmont Landry
    Essassi, El Mokhtar
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2020, 76 : 605 - +
  • [32] Synthesis, crystal structure, and non-covalent interactions in 4-hydrazinobenzoic acid hydrochloride
    Morales-Toyo, Miguel
    Cubillan, Nestor
    Glidewell, Christopher
    Seijas, Luis
    Boscan-Melean, Katerin
    Restrepo, Jelen
    JOURNAL OF MOLECULAR STRUCTURE, 2020, 1201
  • [33] Synthesis, crystal structure, and non-covalent interactions in ethyl 4-hydrazinobenzoate hydrochloride
    Restrepo, Jelem
    Glidewell, Christopher
    Cubillan, Nestor
    Alvarado, Ysaias
    Dege, Necmi
    Morales-Toyo, Miguel
    JOURNAL OF MOLECULAR STRUCTURE, 2019, 1177 : 363 - 370
  • [34] Crystal Structure Analysis and Topological Study of Non-covalent Interactions in 2,2-Biimidazole:Salicylic Acid 2:1 Co-crystal
    Julia Bruno-Colmenarez
    Reinaldo Atencio
    Marinel Quintero
    Luis Seijas
    Rafael Almeida
    Luis Rincón
    Journal of Chemical Crystallography, 2017, 47 : 47 - 58
  • [35] Crystal Structure Analysis and Topological Study of Non-covalent Interactions in 2,2-Biimidazole:Salicylic Acid 2:1 Co-crystal
    Bruno-Colmenarez, Julia
    Atencio, Reinaldo
    Quintero, Marinel
    Seijas, Luis
    Almeida, Rafael
    Rincon, Luis
    JOURNAL OF CHEMICAL CRYSTALLOGRAPHY, 2017, 47 (1-2) : 47 - 58
  • [36] Synthesis, crystal structure, DFT calculations and Hirshfeld surface analysis of 2-(1-decyl-2-oxo-indolin-3-ylidene)propanedinitrile
    Rayni, Ibtissam
    El Bakri, Youness
    Lai, Chin-Hung
    El Ghayati, L'houssaine
    Essassi, El Mokhtar
    Mague, Joel T.
    ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2019, 75 : 21 - +
  • [37] Non-Covalent Interactions in the Crystal Structure of Methyl 4-Hydroxy-3-Nitrobenzoate
    Fu, Xin-Ling
    Li, Jiang-Sheng
    Simpson, Jim
    CRYSTALS, 2012, 2 (02): : 669 - 674
  • [38] On-surface solvent-free crystal-to-co-crystal conversion by non-covalent interactions
    Van Der Boom, M.E. (milko.vanderboom@weizmann.ac.il), 1600, American Chemical Society (136):
  • [39] On-Surface Solvent-Free Crystal-to-Co-crystal Conversion by Non-Covalent Interactions
    Boterashvili, Meital
    Lahav, Michal
    Shankar, Sreejith
    Facchetti, Antonio
    van der Boom, Milko E.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2014, 136 (34) : 11926 - 11929
  • [40] Hirshfeld surface and fingerprint plot analysis of non-covalent interaction (NCI) in CuII -based catecholase models
    Choudhury, Megha Sen
    Dasgupta, Sanchari
    Das, Debasis
    Bhattacharya, Abir
    Mukhopadhyay, Madhumita
    COMPUTATIONAL AND THEORETICAL CHEMISTRY, 2024, 1238