A large-scale machine learning analysis of inorganic nanoparticles in preclinical cancer research

被引:3
|
作者
Mendes, Barbara B. [1 ]
Zhang, Zilu [2 ]
Conniot, Joao [1 ]
Sousa, Diana P. [1 ]
Ravasco, Joao M. J. M. [1 ]
Onweller, Lauren A. [2 ]
Lorenc, Andzelika [3 ,4 ]
Rodrigues, Tiago [3 ]
Reker, Daniel [2 ,5 ]
Conde, Joao [1 ]
机构
[1] Univ NOVA Lisboa, Fac Ciencias Med NMS FCM, NOVA Med Sch, ToxOm, Lisbon, Portugal
[2] Duke Univ, Dept Biomed Engn, Durham, NC 27708 USA
[3] Univ Lisbon, Fac Farm, Inst Invest Medicamento iMed, Lisbon, Portugal
[4] Nicolaus Copernicus Univ Torun, Ludw Rydygier Coll Med Bydgoszcz, Dept Biopharm, Bydgoszcz, Poland
[5] Duke Univ, Duke Canc Inst, Sch Med, Durham, NC 27708 USA
基金
美国国家卫生研究院; 美国国家科学基金会; 欧洲研究理事会;
关键词
STRATEGIES; TARGET;
D O I
10.1038/s41565-024-01673-7
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
Owing to their distinct physical and chemical properties, inorganic nanoparticles (NPs) have shown promising results in preclinical cancer therapy, but designing and engineering them for effective therapeutic purposes remains a challenge. Although a comprehensive database of inorganic NP research is not currently available, it is crucial for developing effective cancer therapies. In this context, machine learning (ML) has emerged as a transformative tool, but its adaptation to nanomedicine is hindered by inexistent or small datasets. Here we assembled a large database of inorganic NPs, comprising experimental datasets from 745 preclinical studies in cancer nanomedicine. Using descriptive statistics and explainable ML models we mined this database to gain knowledge of inorganic NP design patterns and inform future NP research for cancer treatment. Our analyses suggest that NP shape and therapy type are prominent features in determining in vivo efficacy, measured as a percentage of tumour reduction. Moreover, our database provides a large-scale open-access resource for discriminative ML that the broader nanotechnology community can utilize. Our work blueprints data mining for translational cancer research and offers evidence for standardizing NP reporting to accelerate and de-risk inorganic NP-based drug delivery, which may help to improve patient outcomes in clinical settings. This analysis leverages a large-scale literature review, text mining, statistics and machine learning to identify trends, shortcomings and future opportunities in developing and deploying inorganic nanoparticles for cancer diagnosis and therapy.
引用
收藏
页码:867 / 878
页数:14
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