Droplet microfluidics for time-resolved serial crystallography

被引:1
|
作者
Stubbs, Jack [1 ,2 ]
Hornsey, Theo [1 ]
Hanrahan, Niall [3 ,4 ]
Esteban, Luis Blay [5 ]
Bolton, Rachel [1 ,2 ]
Maly, Martin [1 ,4 ]
Basu, Shibom [6 ]
Orlans, Julien [7 ]
De Sanctis, Daniele [7 ]
Shim, Jung-Uk [8 ]
Stewart, Patrick D. Shaw [9 ]
Orville, Allen M. [2 ,10 ]
Tews, Ivo [1 ,4 ]
West, Jonathan [4 ,11 ]
机构
[1] Univ Southampton, Sch Biol Sci, Fac Environm & Life Sci, Southampton SO17 1BJ, England
[2] Harwell Sci & Innovat Campus, Diamond Light Source, Didcot, Oxon, England
[3] Univ South ampton, Sch Chem, Fac Engn & Phys Sci, Southampton SO17 1BJ, England
[4] Univ Southampton, Inst Life Sci, Southampton SO17 1BJ, England
[5] Univ Carlemany, Avenida Verge De Canolich 47,, Principat Dandorra AD600, Spain
[6] European Mol Biol Lab, Grenoble Outstat,71 Ave Martyrs, F-38042 Grenoble 9, CS 90181, France
[7] European Synchrotron Radiat Facil ESRF, 71 Ave Martyrs, F-38042 Grenoble 9, France
[8] Univ Leeds, Fac Engn & Phys Sci, Leeds LS2 9JT, England
[9] Douglas Instruments Ltd, Hungerford RG17 7HD, England
[10] Harwell Sci & Innovat Campus, Res Complex Harwell, Didcot OX11 0FA, Oxon, England
[11] Univ Southampton, Canc Sci, Fac Med, Southampton SO17 1BJ, England
来源
IUCRJ | 2024年 / 11卷
基金
英国惠康基金; 英国生物技术与生命科学研究理事会; 英国工程与自然科学研究理事会; 英国科学技术设施理事会;
关键词
droplet microfluidics; crystal miniaturization; micromixing; time-resolved serial crystallography; MACROMOLECULAR CRYSTALLOGRAPHY; PROTEIN CRYSTALLIZATION; ROOM-TEMPERATURE; ON-DEMAND; CHIP; INTERMEDIATE; NUCLEATION; INTERFACE; GROWTH;
D O I
10.1107/S2052252524001799
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Serial crystallography requires large numbers of microcrystals and robust strategies to rapidly apply substrates to initiate reactions in time-resolved studies. Here, we report the use of droplet miniaturization for the controlled production of uniform crystals, providing an avenue for controlled substrate addition and synchronous reaction initiation. The approach was evaluated using two enzymatic systems, yielding 3 mu m crystals of lysozyme and 2 mu m crystals of Pdx1, an Arabidopsis enzyme involved in vitamin B6 biosynthesis. A seeding strategy was used to overcome the improbability of Pdx1 nucleation occurring with diminishing droplet volumes. Convection within droplets was exploited for rapid crystal mixing with ligands. Mixing times of <2 ms were achieved. Droplet microfluidics for crystal size engineering and rapid micromixing can be utilized to advance time-resolved serial crystallography.
引用
收藏
页码:237 / 248
页数:12
相关论文
共 50 条
  • [41] Watching the release of a photopharmacological drug from tubulin using time-resolved serial crystallography
    Wranik, Maximilian
    Weinert, Tobias
    Slavov, Chavdar
    Masini, Tiziana
    Furrer, Antonia
    Gaillard, Natacha
    Gioia, Dario
    Ferrarotti, Marco
    James, Daniel
    Glover, Hannah
    Carrillo, Melissa
    Kekilli, Demet
    Stipp, Robin
    Skopintsev, Petr
    Brunle, Steffen
    Muhlethaler, Tobias
    Beale, John
    Gashi, Dardan
    Nass, Karol
    Ozerov, Dmitry
    Johnson, Philip J. M.
    Cirelli, Claudio
    Bacellar, Camila
    Braun, Markus
    Wang, Meitian
    Dworkowski, Florian
    Milne, Chris
    Cavalli, Andrea
    Wachtveitl, Josef
    Steinmetz, Michel O. O.
    Standfuss, Jorg
    [J]. NATURE COMMUNICATIONS, 2023, 14 (01)
  • [42] Using the ALEX nylon mesh holder for time-resolved serial crystallography: successes and drawbacks
    Sherrell, Darren
    Wilamowski, Mateusz
    Lavens, Alex
    Henning, Robert
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2021, 77 : A85 - A85
  • [43] Watching the release of a photopharmacological drug from tubulin using time-resolved serial crystallography
    Maximilian Wranik
    Tobias Weinert
    Chavdar Slavov
    Tiziana Masini
    Antonia Furrer
    Natacha Gaillard
    Dario Gioia
    Marco Ferrarotti
    Daniel James
    Hannah Glover
    Melissa Carrillo
    Demet Kekilli
    Robin Stipp
    Petr Skopintsev
    Steffen Brünle
    Tobias Mühlethaler
    John Beale
    Dardan Gashi
    Karol Nass
    Dmitry Ozerov
    Philip J. M. Johnson
    Claudio Cirelli
    Camila Bacellar
    Markus Braun
    Meitian Wang
    Florian Dworkowski
    Chris Milne
    Andrea Cavalli
    Josef Wachtveitl
    Michel O. Steinmetz
    Jörg Standfuss
    [J]. Nature Communications, 14
  • [44] The hit-and-return system enables efficient time-resolved serial synchrotron crystallography
    Schulz, Eike C.
    Mehrabi, Pedram
    Mueller-Werkmeister, Henrike M.
    Tellkamp, Friedjof
    Jha, Ajay
    Stuart, William
    Persch, Elke
    De Gasparo, Raoul
    Diederich, Francois
    Pai, Emil F.
    Miller, R. J. Dwayne
    [J]. NATURE METHODS, 2018, 15 (11) : 901 - +
  • [45] The hit-and-return system enables efficient time-resolved serial synchrotron crystallography
    Eike C. Schulz
    Pedram Mehrabi
    Henrike M. Müller-Werkmeister
    Friedjof Tellkamp
    Ajay Jha
    William Stuart
    Elke Persch
    Raoul De Gasparo
    François Diederich
    Emil F. Pai
    R. J. Dwayne Miller
    [J]. Nature Methods, 2018, 15 : 901 - 904
  • [46] Fixed target matrix for femtosecond time-resolved and in situ serial micro-crystallography
    Mueller, C.
    Marx, A.
    Epp, S. W.
    Zhong, Y.
    Kuo, A.
    Balo, A. R.
    Soman, J.
    Schotte, F.
    Lemke, H. T.
    Owen, R. L.
    Pai, E. F.
    Pearson, A. R.
    Olson, J. S.
    Anfinrud, P. A.
    Ernst, O. P.
    Miller, R. J. Dwayne
    [J]. STRUCTURAL DYNAMICS-US, 2015, 2 (05):
  • [47] Time-resolved serial femtosecond crystallography on fatty-acid photodecarboxylase: lessons learned
    Hadjidemetriou, Kyprianos
    Coquelle, Nicolas
    Barends, Thomas R. M.
    De Zitter, Elke
    Schlichting, Ilme
    Colletier, Jacques-Philippe
    Weik, Martin
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2022, 78 : 1131 - 1142
  • [48] Low-pass spectral analysis of time-resolved serial femtosecond crystallography data
    Casadei, Cecilia M.
    Hosseinizadeh, Ahmad
    Bliven, Spencer
    Weinert, Tobias
    Standfuss, Jorg
    Fung, Russell
    Schertler, Gebhard F. X.
    Santra, Robin
    [J]. STRUCTURAL DYNAMICS-US, 2023, 10 (03):
  • [49] Time-resolved serial crystallography of bacteriorhodopsin using synchrotrons and X-ray lasers
    Standfuss, Joerg
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2017, 73 : C1049 - C1049
  • [50] Ultra-fast time-resolved serial femtosecond crystallography on myoglobin ligand dissociation
    Schlichting, Ilme
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2017, 253