Information Technology Infrastructure for Agriculture Genotyping Studies

被引：3
|
作者：
Pardamean, Bens [1 ]
Baurley, James W. [1 ]
Perbangsa, Anzaludin S. [1 ]
Utami, Dwinita [2 ]
Rijzaani, Habib [2 ]
Satyawan, Dani [2 ]
机构：
[1] Bina Nusantara Univ, Bioinformat & Data Sci Res Ctr, Jakarta, Indonesia
[2] Indonesian Ctr Agr Biotechnol & Genet Resources R, Bogor, Indonesia
来源：
JOURNAL OF INFORMATION PROCESSING SYSTEMS | 2018年 / 14卷 / 03期
关键词：
Agriculture Biotechnology; Big Data; Genotyping; Infrastructure; IT;
D O I：
10.3745/JIPS.01.0029
中图分类号：
TP [自动化技术、计算机技术];
学科分类号：
0812 ;
摘要：
In efforts to increase its agricultural productivity, the Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development has conducted a variety of genomic studies using high-throughput DNA genotyping and sequencing. The large quantity of data (big data) produced by these biotechnologies require high performance data management system to store, backup, and secure data. Additionally, these genetic studies are computationally demanding, requiring high performance processors and memory for data processing and analysis. Reliable network connectivity with large bandwidth to transfer data is essential as well as database applications and statistical tools that include cleaning, quality control, querying based on specific criteria, and exporting to various formats that are important for generating high yield varieties of crops and improving future agricultural strategies. This manuscript presents a reliable, secure, and scalable information technology infrastructure tailored to Indonesian agriculture genotyping studies.
引用
收藏
页码：655 / 665
页数：11
相关论文
共 50 条
  • [41] Information Technology Infrastructure Library and the migration to cloud computing
    Cardoso, Abilio
    Moreira, Fernando
    Fonseca Escudero, David
    UNIVERSAL ACCESS IN THE INFORMATION SOCIETY, 2018, 17 (03) : 503 - 515
  • [42] Preconditions for information and technology infrastructure of trade enterprises forming
    Fedulova, L. I.
    Kucher, D. B.
    MARKETING AND MANAGEMENT OF INNOVATIONS, 2015, (01): : 73 - 86
  • [43] Democracy, information, and communication technology infrastructure and environmental quality
    Liu, Wenjing
    Wang, Jiang
    ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2023, 30 (48) : 105259 - 105274
  • [44] Server Virtualization in Information and Communication Technology Infrastructure in Turkey
    Baktir, A. C.
    Kulahoglu, Y. C.
    Erbay, O.
    Metin, B.
    2013 21ST TELECOMMUNICATIONS FORUM (TELFOR), 2013, : 13 - 16
  • [45] Democracy, information, and communication technology infrastructure and environmental quality
    Wenjing Liu
    Jiang Wang
    Environmental Science and Pollution Research, 2023, 30 : 105259 - 105274
  • [46] The implications of information technology infrastructure for business process redesign
    Broadbent, M
    Weill, P
    St Clair, D
    MIS QUARTERLY, 1999, 23 (02) : 159 - 182
  • [47] Information Technology Infrastructure for Data Streams Native Filtering
    El Sibai, Rayane
    Bou Abdo, Jacques
    Demerjian, Jacques
    Chabchoub, Yousra
    Chiky, Raja
    Barbar, Kablan
    2018 IEEE MIDDLE EAST AND NORTH AFRICA COMMUNICATIONS CONFERENCE (MENACOMM), 2018, : 58 - 63
  • [48] Knowledge management: Building a flexible information technology infrastructure
    Watad, MM
    6TH WORLD MULTICONFERENCE ON SYSTEMICS, CYBERNETICS AND INFORMATICS, VOL VIII, PROCEEDINGS: CONCEPTS AND APPLICATIONS OF SYSTEMICS, CYBERNETICS AND INFORMATICS II, 2002, : 124 - 129
  • [49] HOSPITAL INFORMATION TECHNOLOGY INFRASTRUCTURE AFFECTS QUALITY OF CARE
    Sasaki, N.
    Okumura, A.
    Yamaguchi, N.
    Imanaka, Y.
    INTERNATIONAL JOURNAL FOR QUALITY IN HEALTH CARE, 2016, 28 : 62 - 62
  • [50] SURVEY OF INFORMATION TECHNOLOGY USE FOR MUNICIPAL INFRASTRUCTURE MANAGEMENT
    Zeb, Jehan
    Froese, Thomas
    Vanier, Dana
    JOURNAL OF INFORMATION TECHNOLOGY IN CONSTRUCTION, 2012, 17 : 179 - 193
12345