Draft Genome Sequence of the Phytopathogenic Fungus Ganoderma boninense, the Causal Agent of Basal Stem Rot Disease on Oil Palm

被引:0
|
作者
Utomo, Condro [1 ]
Tanjung, Zulfikar Achmad [2 ]
Aditama, Redi [2 ]
Buana, Rika Fithri Nurani [3 ]
Pratomo, Antonius Dony Madu [4 ]
Tryono, Reno [5 ]
Liwang, Tony [1 ]
机构
[1] PT SMART Tbk, Plant Prod & Biotechnol Div, Dept Biotechnol, Bogor, Indonesia
[2] PT SMART Tbk, Sect Bioinformat, Bogor, Indonesia
[3] PT SMART Tbk, Sect Microbiome Technol, Bogor, Indonesia
[4] PT SMART Tbk, Sect Clonal Technol, Bogor, Indonesia
[5] PT SMART Tbk, Sect Genet Engn, Bogor, Indonesia
关键词
D O I
10.1128/genomeA.00122-18
中图分类号
学科分类号
摘要
Ganoderma boninense is the dominant fungal pathogen of basal stem rot (BSR) disease on Elaeis guineensis. We sequenced the nuclear genome of mycelia using both Illumina and Pacific Biosciences platforms for assembly of scaffolds. The draft genome comprised 79.24 Mb, 495 scaffolds, and 26,226 predicted coding sequences.
引用
收藏
页数:2
相关论文
共 50 条
  • [1] Control of Ganoderma boninense: A Causal Agent of Basal Stem Rot Disease in Oil Palm with Endophyte Bacteria In Vitro
    Bivi, M. Rahamath
    Farhana, M. Siti Noor
    Khairulmazmi, A.
    Idris, A.
    [J]. INTERNATIONAL JOURNAL OF AGRICULTURE AND BIOLOGY, 2010, 12 (06) : 833 - 839
  • [2] Draft Genome Sequence of a Phytopathogenic Ganoderma sp. Strain That Causes Basal Stem Rot Disease on Oil Palm in Sabah, Malaysia
    Voo, Christopher L. Y.
    Yeo, Daniel E. T.
    Chong, Khim-Phin
    Rodrigues, Kenneth F.
    [J]. MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2020, 9 (01):
  • [3] The role of syringic acid in the interaction between oil palm and Ganoderma boninense, the causal agent of basal stem rot
    Chong, K. P.
    Atong, M.
    Rossall, S.
    [J]. PLANT PATHOLOGY, 2012, 61 (05) : 953 - 963
  • [4] Identification and development of new polymorphic microsatellite markers using genome assembly for Ganoderma boninense, causal agent of oil palm basal stem rot disease
    Merciere, Maxime
    Laybats, Anthony
    Carasco-Lacombe, Catherine
    Tan, Joon Sheong
    Klopp, Christophe
    Durand-Gasselin, Tristan
    Alwee, Sharifah Shahrul Rabiah Syed
    Camus-Kulandaivelu, Letizia
    Breton, Frederic
    [J]. MYCOLOGICAL PROGRESS, 2015, 14 (11)
  • [5] Identification and development of new polymorphic microsatellite markers using genome assembly for Ganoderma boninense, causal agent of oil palm basal stem rot disease
    Maxime Mercière
    Anthony Laybats
    Catherine Carasco-Lacombe
    Joon Sheong Tan
    Christophe Klopp
    Tristan Durand-Gasselin
    Sharifah Shahrul Rabiah Syed Alwee
    Létizia Camus-Kulandaivelu
    Fréderic Breton
    [J]. Mycological Progress, 2015, 14
  • [6] Ganoderma zonatum Is the Causal Agent of Basal Stem Rot in Oil Palm in Colombia
    Yulieth Castillo, Sandra
    Camila Rodriguez, Maria
    Felipe Gonzalez, Luis
    Franky Zuniga, Leon
    Adriana Mestizo, Yuri
    Camilo Medina, Hector
    Montoya, Carmenza
    Morales, Anuar
    Mauricio Romero, Hernan
    Andrea Sarria, Greicy
    [J]. JOURNAL OF FUNGI, 2022, 8 (03)
  • [7] Enhancing biological control of basal stem rot disease (Ganoderma boninense) in oil palm plantations
    Susanto, A
    Sudharto, PS
    Purba, RY
    [J]. MYCOPATHOLOGIA, 2005, 159 (01) : 153 - 157
  • [8] Enhancing biological control of basal stem rot disease (Ganoderma boninense) in oil palm plantations
    A. Susanto
    P.S. Sudharto
    R.Y. Purba
    [J]. Mycopathologia, 2005, 159 : 153 - 157
  • [9] Identification of Ganoderma, the causal agent of basal stem rot disease in oil palm using a molecular method
    C. Utomo
    S. Werner
    F. Niepold
    H.B. Deising
    [J]. Mycopathologia, 2005, 159 : 159 - 170
  • [10] Identification of Ganoderma, the causal agent of basal stem rot disease in oil palm using a molecular method
    Utomo, C
    Werner, S
    Niepold, F
    Deising, HB
    [J]. MYCOPATHOLOGIA, 2005, 159 (01) : 159 - 170