Brief communication genotyping of Burkholderia pseudomallei revealed high genetic variability among isolates from a single population group

被引:0
|
作者
Zueter, Abdelrahman Mohammad [1 ]
Rahman, Zaidah Abdul [1 ]
Yean, Chan Yean [1 ]
Harun, Azian [1 ]
机构
[1] Univ Sains Malaysia, Sch Med Sci, Dept Med Microbiol & Parasitol, Kubang Kerian 16150, Kelantan, Malaysia
关键词
Burkholderia pseudomallei; melioidosis; multi-locus sequence typing; Malaysia;
D O I
暂无
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Burkholderia pseudomallei is a soil dwelling Gram-negative bacteria predominates in Southeast Asia zone and the tropical part of Australia. Genetic diversity has been explored among various populations and environments worldwide. To date, little data is available on MLST profiling of clinical B. pseudomallei isolates in peninsular Malaysia. In this brief report, thirteen culture positive B. pseudomallei cases collected from a single population of Terengganu state in the Western Peninsular Malaysia and were confirmed by In-house TTS1-PCR. Isolates were subjected for multi-locus sequence typing (MLST) to explore their genotypic diversity and to investigate for possible clonal clustering of a certain sequence type. Patient's clinical information was examined to investigate for clinical correlation among the different genotypes. In spite of small sample set, MLST results indicated predictive results; considerable genotypic diversity, predominance and novelty among B. pseudomallei collected over a single geographically-located population in Malaysia. Massive genotypic heterogeneity was observed; 8 different sequence types with predominance of sequence type 54 and discovery of two novel sequence types. However, no clear pathogenomic or organ tropism clonal relationships were predicted.
引用
收藏
页码:41 / 47
页数:7
相关论文
共 13 条
  • [1] Unravelling the Molecular Epidemiology and Genetic Diversity among Burkholderia pseudomallei Isolates from South India Using Multi-Locus Sequence Typing
    Tellapragada, Chaitanya
    Kamthan, Aayushi
    Shaw, Tushar
    Vandana, K. E.
    Kumar, Subodh
    Bhat, Vinod
    Mukhopadhyay, Chiranjay
    [J]. PLoS One, 2016, 11 (12):
  • [2] Genetic variability among Schistosoma japonicum isolates from the Philippines, Japan and China revealed by sequence analysis of three mitochondrial genes
    Chen, Fen
    Li, Juan
    Sugiyama, Hiromu
    Zhou, Dong-Hui
    Song, Hui-Qun
    Zhao, Guang-Hui
    Zhu, Xing-Quan
    [J]. MITOCHONDRIAL DNA, 2015, 26 (01): : 35 - 40
  • [3] Isolation and RFLP genotyping of Toxoplasma gondii from the domestic dogs (Canis familiaris) from Grenada, West Indies revealed high genetic variability
    Dubey, J. P.
    Tiwari, K.
    Chikweto, A.
    DeAllie, C.
    Sharma, R.
    Thomas, D.
    Choudhary, S.
    Ferreira, L. R.
    Oliveira, S.
    Verma, S. K.
    Kwok, O. C. H.
    Su, C.
    [J]. VETERINARY PARASITOLOGY, 2013, 197 (3-4) : 623 - 626
  • [4] Genetic variability among Trichuris ovis isolates from different hosts in Guangdong Province, China revealed by sequences of three mitochondrial genes
    Wang, Yan
    Liu, Guo-Hua
    Li, Jia-Yuan
    Xu, Min-Jun
    Ye, Yong-Gang
    Zhou, Dong-Hui
    Song, Hui-Qun
    Lin, Rui-Qing
    Zhu, Xing-Quan
    [J]. MITOCHONDRIAL DNA, 2013, 24 (01): : 50 - 54
  • [5] Genetic variability among Dicrocoelium dendriticum isolates from different regions in Shaanxi Province, China revealed by sequences of three mitochondrial genes
    Zhao, Guang-Hui
    Bian, Qing-Qing
    Ren, Wan-Xin
    Jia, Yan-Qing
    Cheng, Wen-Yu
    Fang, Yan-Qin
    Song, Jun-Ke
    Lin, Qing
    [J]. MITOCHONDRIAL DNA, 2013, 24 (06): : 683 - 688
  • [6] Genetic variability among Schistosoma japonicum isolates from different endemic regions in China revealed by sequences of three mitochondrial DNA genes
    Zhao, G. H.
    Mo, X. H.
    Zou, F. C.
    Li, J.
    Weng, Y. B.
    Lin, R. Q.
    Xia, C. M.
    Zhu, X. Q.
    [J]. VETERINARY PARASITOLOGY, 2009, 162 (1-2) : 67 - 74
  • [7] Genetic variability among Hymenolepis nana isolates from different geographical regions in China revealed by sequence analysis of three mitochondrial genes
    Cheng, Tian
    Gao, De-Zhen
    Zhu, Wei-Ning
    Fang, Su-Fang
    Chen, Ning
    Zhu, Xing-Quan
    Liu, Guo-Hua
    Lin, Rui-Qing
    [J]. MITOCHONDRIAL DNA PART A, 2016, 27 (06) : 4646 - 4650
  • [8] Genetic variability among group A and B respiratory syncytial virus isolates from a large referral hospital in New Delhi, India
    Rajala, MS
    Sullender, WM
    Prasad, AK
    Dar, L
    Broor, S
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2003, 41 (06) : 2311 - 2316
  • [9] Genetic variability among Syphacia obvelata isolates from laboratory mice in four different geographical locations of China revealed by sequence analyses of five mitochondrial genes
    Wang, Chun-Ren
    Lou, Yan
    Zhang, Yan
    Wang, Wen-Tao
    Zheng, Xu
    Xu, Wen-Wen
    Zhang, Ying
    Tian, Si-Qin
    Na, Lu
    Chang, Qiao-Cheng
    [J]. MITOCHONDRIAL DNA, 2015, 26 (02): : 213 - 216
  • [10] Low genetic variability and high isolation of a post-harvest South American pinniped population as revealed by genome-wide single nucleotide polymorphisms
    Peralta, Diego M.
    Ibanez, Ezequiel A.
    Lucero, Sergio
    Cappozzo, Humberto L.
    Ceballos, Santiago G.
    Tunez, Juan, I
    [J]. ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 2024,