The presence, distribution and origin of substance P (SP), neuropeptide Y (NPY), and CGRP-immunoreactive axons in rat iris were investigated in whole mount preparations, with special respect to the localization of the "classical" adrenergic and cholinergic ground plexuses. SP-IR fibres are distributed parallel to the pupillary margin in the sphincter muscle, and in an irregular plexus in the dilator muscle. The distribution of CGRP-IR fibers was similar to this. Both SP- and CGRP-IR elements originated from the Gasserian ganglion. Following electrocoagulation of the ophthalmic nerve, both SP- and CGRP-IR nerves completely disappeared, while in the caudal nucleus of the trigeminal nerve a substantial decrease of the immunoreactivity was found. NPY-IR fibres have also been demonstrated in the anterior uvea, displaying a pattern similar to that of the adrenergic nerves. In the sympathectomized iris, there was a marked decrease in the density of NPY-IR fibres indicating that NPY most likely coexists with the classical sympathetic neurotransmitter, noradrenalin in the sympathetic nerve supply deriving from the superior cervical ganglion. 1 month after sympathectomy, there was an increase in the density (and possibly also in the number) of both SP- and CGRP-IR fibres in the denervated iris. Subsequent immuno-electron microscopic analysis has demonstrated that both SP- and CGRP-IR fibres are unmyelinated axons, embedded in a common Schwann cell cytoplasm together with a number of axons devoid of immunoreactivity. In conclusion, it appears that in the peripheral autonomic innervation apparatus of the rat iris, syC and drC axons proceed in close vicinity and, in addition to the coexistence of neuropeptides and "classic" neurotransmitter, the relative amount of these substances is subjected to dynamic regulation.