PARALLEL COMPUTATION OF THE MP2 ENERGY ON DISTRIBUTED-MEMORY COMPUTERS

被引:28
|
作者
MARQUEZ, AM [1 ]
DUPUIS, M [1 ]
机构
[1] IBM CORP, DEPT MLMA, KINGSTON, NY 12401 USA
关键词
D O I
10.1002/jcc.540160402
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A parallel distributed implementation of the second-order Moller-Plesset perturbation theory method, widely used in quantum chemistry, is presented. Parallelization strategy and performance for the HONDO quantum chemistry program running on a network of Unix computers are also discussed. Superlinear speedups are obtained through a combined use of the CPU and memory of the different processors. Performance for standard and direct algorithms are presented and discussed. A superdirect algorithm that eliminates the communication bottleneck during the integral transformation step is also proposed. (C) 1995 by John Wiley and Sons, Inc.
引用
收藏
页码:395 / 404
页数:10
相关论文
共 50 条
  • [1] A PARALLEL VECTOR EQUATION SOLVER FOR DISTRIBUTED-MEMORY COMPUTERS
    QIN, JN
    NGUYEN, DT
    [J]. COMPUTING SYSTEMS IN ENGINEERING, 1994, 5 (01): : 19 - 25
  • [2] Representing shared data on distributed-memory parallel computers
    Herley, KT
    [J]. MATHEMATICAL SYSTEMS THEORY, 1996, 29 (02): : 111 - 156
  • [3] PARALLEL COMPUTATION OF GROBNER BASES ON DISTRIBUTED-MEMORY MACHINES
    SAWADA, H
    TERASAKI, S
    AIBA, A
    [J]. JOURNAL OF SYMBOLIC COMPUTATION, 1994, 18 (03) : 207 - 222
  • [4] A framework for scalable greedy coloring on distributed-memory parallel computers
    Bozdag, Doruk
    Gebremedhin, Assefaw H.
    Manne, Fredrik
    Boman, Erik G.
    Catalyurek, Umit V.
    [J]. JOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING, 2008, 68 (04) : 515 - 535
  • [5] Parallel computation of second derivatives of RHF energy on distributed memory computers
    Marquez, AM
    Oviedo, J
    Sanz, JF
    Dupuis, M
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 1997, 18 (02) : 159 - 168
  • [6] EPEE - AN EIFFEL ENVIRONMENT TO PROGRAM DISTRIBUTED-MEMORY PARALLEL COMPUTERS
    JEZEQUEL, JM
    [J]. JOURNAL OF OBJECT-ORIENTED PROGRAMMING, 1993, 6 (02): : 48 - 54
  • [7] PARALLEL MATRIX TRANSPOSE ALGORITHMS ON DISTRIBUTED-MEMORY CONCURRENT COMPUTERS
    CHOI, JY
    DONGARRA, JJ
    WALKER, DW
    [J]. PARALLEL COMPUTING, 1995, 21 (09) : 1387 - 1405
  • [8] PERFORMANCE ANALYSIS OF DISTRIBUTED-MEMORY COMPUTERS WITH PARALLEL NODE ARCHITECTURE
    IANNELLO, G
    MAZZEO, A
    MAZZOCCA, N
    [J]. JOURNAL OF SYSTEMS AND SOFTWARE, 1995, 29 (02) : 107 - 120
  • [9] IMPLEMENTATION OF A PARALLEL DIRECT SCF ALGORITHM ON DISTRIBUTED-MEMORY COMPUTERS
    FURLANI, TR
    KING, HF
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 1995, 16 (01) : 91 - 104
  • [10] Efficient implementation of tree accumulations on distributed-memory parallel computers
    Matsuzaki, Kiminori
    [J]. COMPUTATIONAL SCIENCE - ICCS 2007, PT 2, PROCEEDINGS, 2007, 4488 : 609 - 616