APPLICATION OF 2D AND 3D NMR EXPERIMENTS TO THE CONFORMATIONAL STUDY OF A DIANTENNARY OLIGOSACCHARIDE

被引:27
|
作者
DEWAARD, P
LEEFLANG, BR
VLIEGENTHART, JFG
BOELENS, R
VUISTER, GW
KAPTEIN, R
机构
[1] UNIV UTRECHT, BIJVOET CTR, DEPT BIOORGAN CHEM, PADUALAAN 8, 3584 CH UTRECHT, NETHERLANDS
[2] UNIV UTRECHT, BIJVOET CTR, DEPT NMR SPECT, 3584 CH UTRECHT, NETHERLANDS
关键词
CONFORMATIONAL ANALYSIS; MULTIDIMENSIONAL NMR; OLIGOSACCHARIDES;
D O I
10.1007/BF01875317
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
By the application of homonuclear 3D NOE-HOHAHA and heteronuclear ID HMQC-NOE experiments in studies of complex oligosaccharides, NOEs can be investigated which are hidden in conventional 2D NOE spectra. In the 3D NOE-HOHAHA spectrum omega-3 cross sections were considered to be the most suitable for assignment of NOEs. Alternatively, these cross sections could be measured separately in selective 2D HOHAHA-NOE spectroscopy. The advantages and limitations of the 2D alternative are compared with those of the 3D NOE-HOHAHA approach. In 3D HMQC-NOE spectroscopy the larger chemical shift displacement of the carbon spectrum with respect to the proton spectrum can be used to unmask NOEs hidden in the bulk region. If the extra proton dimension is not needed, 2D HMQC-NOE is a good alternative. The suitability of 2D and 3D NOE-HOHAHA and HMQC-NOE experiments for the estimation of proton-proton distances is demonstrated by comparing the results of these experiments on a diantennary asparagine-linked oligosaccharide with those of a conventional 2D NOE experiment. NOEs identified in the 2D and 3D NOE-HOHAHA as well as HMQC-NOE experiments, so far not identified or not quantified in 2D NOE experiments. are discussed in relation to each glycosidic linkage. The flexibility of the Man-alpha(1-3)Man linkage is demonstrated, confirming the existence of an ensemble of conformations for this linkage.
引用
收藏
页码:211 / 226
页数:16
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