Virtual methylome dissection facilitated by single-cell analyses

被引：0
|
作者：
Liduo Yin
Yanting Luo
Xiguang Xu
Shiyu Wen
Xiaowei Wu
Xuemei Lu
Hehuang Xie
机构：
[1] Chinese Academy of Sciences,State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology
[2] University of Chinese Academy of Sciences,Kunming College of Life Science
[3] Chinese Academy of Sciences,Center for Excellence in Animal Evolution and Genetics
[4] Chinese Academy of Sciences,Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics
[5] Virginia Tech,Epigenomics and Computational Biology Lab, Fralin Life Sciences Institute at Virginia Tech
[6] Virginia Tech,Department of Biological Sciences
[7] Virginia Tech,Department of Statistics
[8] Virginia Tech,Department of Biomedical Sciences and Pathobiology, Virginia
[9] University of Chinese Academy of Sciences,Maryland College of Veterinary Medicine
来源：
Epigenetics & Chromatin | / 12卷
关键词：
DNA methylation; Cellular heterogeneity; Nonnegative matrix factorization; Single-cell methylome;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [1] Virtual methylome dissection facilitated by single-cell analyses
    Yin, Liduo
    Luo, Yanting
    Xu, Xiguang
    Wen, Shiyu
    Wu, Xiaowei
    Lu, Xuemei
    Xie, Hehuang
    [J]. EPIGENETICS & CHROMATIN, 2019, 12 (01)
  • [2] Single-cell methylome analysis of mouse blastocyst
    Taniyama, Nobuko
    Kobayashi, Kenta
    Yamane, Junko
    Mori, Tomoya
    Yamashita, Jun K.
    Fujibuchi, Wataru
    [J]. GENES & GENETIC SYSTEMS, 2016, 91 (06) : 346 - 346
  • [3] Computational Methods for Single-cell DNA Methylome Analysis
    Iqbal, Waleed
    Zhou, Wanding
    [J]. GENOMICS PROTEOMICS & BIOINFORMATICS, 2023, 21 (01) : 48 - 66
  • [4] Q-RRBS: a quantitative reduced representation bisulfite sequencing method for single-cell methylome analyses
    Wang, Kangli
    Li, Xianfeng
    Dong, Shanshan
    Liang, Jialong
    Mao, Fengbiao
    Zeng, Cheng
    Wu, Honghu
    Wu, Jinyu
    Cai, Wanshi
    Sun, Zhong Sheng
    [J]. EPIGENETICS, 2015, 10 (09) : 775 - 783
  • [5] Single-cell dissection and microdroplet chemistry
    Outlaw, WH
    Zhang, SQ
    [J]. JOURNAL OF EXPERIMENTAL BOTANY, 2001, 52 (356) : 605 - 614
  • [6] Smart-RRBS for single-cell methylome and transcriptome analysis
    Gu, Hongcang
    Raman, Ayush T.
    Wang, Xiaoxue
    Gaiti, Federico
    Chaligne, Ronan
    Mohammad, Arman W.
    Arczewska, Aleksandra
    Smith, Zachary D.
    Landau, Dan A.
    Aryee, Martin J.
    Meissner, Alexander
    Gnirke, Andreas
    [J]. NATURE PROTOCOLS, 2021, 16 (08) : 4004 - +
  • [7] Single-cell DNA methylome sequencing of human preimplantation embryos
    Zhu, Ping
    Guo, Hongshan
    Ren, Yixin
    Hou, Yu
    Dong, Ji
    Li, Rong
    Lian, Ying
    Fan, Xiaoying
    Hu, Boqiang
    Gao, Yun
    Wang, Xiaoye
    Wei, Yuan
    Liu, Ping
    Yan, Jie
    Ren, Xiulian
    Yuan, Peng
    Yuan, Yifeng
    Yan, Zhiqiang
    Wen, Lu
    Yan, Liying
    Qiao, Jie
    Tang, Fuchou
    [J]. NATURE GENETICS, 2018, 50 (01) : 12 - +
  • [8] Single-cell DNA methylome analysis of circulating tumor cells
    Hengyu Chen
    Zhe Su
    Ruoyan Li
    Ning Zhang
    Hua Guo
    Fan Bai
    [J]. Chinese Journal of Cancer Research, 2021, 33 (03) : 391 - 411
  • [9] Single-cell DNA methylome sequencing of human preimplantation embryos
    Ping Zhu
    Hongshan Guo
    Yixin Ren
    Yu Hou
    Ji Dong
    Rong Li
    Ying Lian
    Xiaoying Fan
    Boqiang Hu
    Yun Gao
    Xiaoye Wang
    Yuan Wei
    Ping Liu
    Jie Yan
    Xiulian Ren
    Peng Yuan
    Yifeng Yuan
    Zhiqiang Yan
    Lu Wen
    Liying Yan
    Jie Qiao
    Fuchou Tang
    [J]. Nature Genetics, 2018, 50 : 12 - 19
  • [10] Single-cell DNA methylome analysis of circulating tumor cells
    Chen, Hengyu
    Su, Zhe
    Li, Ruoyan
    Zhang, Ning
    Guo, Hua
    Bai, Fan
    [J]. CHINESE JOURNAL OF CANCER RESEARCH, 2021, 33 (03) : 391 - +
12345