Twenty-four microsatellite markers for the gray mouse opossum (Tlacuatzin canescens): development from illumina paired-end sequences

被引:0
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作者
Jésica Arcangeli
Fernando A. Cervantes
Stacey L. Lance
Ma. Isabel Salazar
Jorge Ortega
机构
[1] Universidad Nacional Autónoma de México,Departamento de Zoologia, Instituto de Biología
[2] Universidad Nacional Autónoma de México,Posgrado en Ciencias Biológicas
[3] University of Georgia,Savannah River Ecology Laboratory
[4] Escuela Nacional de Ciencias Biológicas,Laboratorio de Inmunología Celular e Inmunopatogénesis, Departamento de Inmunología
[5] Instituto Politécnico Nacional,Laboratorio de Ictiología y Limnología, Posgrado en Ciencias Quimicobiológicas, Departamento de Zoología
[6] Escuela Nacional de Ciencias Biológicas,undefined
[7] Instituto Politécnico Nacional,undefined
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关键词
Illumina; Microsatellites;
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摘要
Tlacuatzin canescens is an opossum species endemic to Mexico from southern Sonora to Oaxaca, with populations in Tres Marías Islands and in central Peninsula of Yucatan. A technique based on Illumina paired-end sequencing of a library highly enriched for microsatellite repeats was used to develop loci. Twenty-four polymorphic (tri- and tetranucleotide) microsatellites were developed and tested as markers in the target species. All markers were genotyped on 18 different individuals from distinct locations. We observed medium to low genetic variation across most loci (mean number of alleles per locus = 8). Levels of expected heterozygosity across all markers was fairly low (mean HE = 0.477, mean HO = 0.480).
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页码:367 / 370
页数:3
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