Use of RSM and CHAID data mining algorithm for predicting mineral nutrition of hazelnut

被引:78
|
作者
Akin, Meleksen [1 ]
Eyduran, Ecevit [2 ]
Reed, Barbara M. [3 ]
机构
[1] Igdir Univ, Fac Agr, Dept Hort, Igdir, Turkey
[2] Igdir Univ, Fac Agr, Dept Anim Sci, Biometry Genet Unit, Igdir, Turkey
[3] USDA ARS, Natl Clonal Germplasm Repository, 33447 Peoria Rd, Corvallis, OR 97333 USA
关键词
Hazelnut; Mineral salts; Micropropagation; Mineral nutrition; Statistical analysis; IN-VITRO RESEARCH; TISSUE-CULTURE; STATISTICAL CONSIDERATIONS; MICROPROPAGATION; GROWTH; MEDIA;
D O I
10.1007/s11240-016-1110-6
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Defining optimal mineral-salt concentrations for in vitro plant development is challenging, due to the many chemical interactions in growth media and genotype variability among plants. Statistical approaches that are easier to interpret are needed to make optimization processes practical. Response Surface Methodology (RSM) and the Chi-Squared Automatic Interaction Detection (CHAID) data mining algorithm were used to analyze the growth of shoots in a hazelnut tissue-culture medium optimization experiment. Driver and Kuniyuki Walnut medium (DKW) salts (NH4NO3, Ca(NO3)(2)center dot 4H(2)O, CaCl2 center dot 2H(2)O, MgSO4 center dot 7H(2)O, KH2PO4 and K2SO4) were varied from 0.5x to 3x DKW concentrations with 42 combinations in a IV-optimal design. Shoot quality, shoot length, multiplication and callus formation were evaluated and analyzed using the two methods. Both analyses indicated that NH4NO3 was a predominant nutrient factor. RSM projected that low NH4NO3 and high KH2PO4 concentrations were significant for quality, shoot length, multiplication and callus formation in some of the hazelnut genotypes. CHAID analysis indicated that NH4NO3 at ae1.701x DKW and KH2PO4 at > 2.012x DKW were the most critical factors for shoot quality. NH4NO3 at ae0.5x DKW and Ca(NO3)(2) at ae1.725x DKW were essential for good multiplication. RSM results were genotype dependent while CHAID included genotype as a factor in the analysis, allowing development of a common medium rather than several genotype specific media. Overall, CHAID results were more specific and easier to interpret than RSM graphs. The optimal growth medium for Corylus avellana L. cultivars should include: 0.5x NH4NO3, 3x KH2PO4, 1.5x Ca(NO3)(2).
引用
收藏
页码:303 / 316
页数:14
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    [J]. Plant Cell, Tissue and Organ Culture (PCTOC), 2017, 128 : 317 - 317
  • [2] Using the CHAID Data Mining Algorithm for Tissue Culture Medium Optimization.
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    [J]. IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL, 2016, 52 : S66 - S66
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  • [4] Data Mining of Students' Response on the University Services using Chi-square Automatic Interaction Detector (CHAID) Algorithm
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  • [6] Data Mining in Pharmacovigilance Practice: Which Algorithm to Use?
    X. Yang
    J. Freeman
    R. Bwire
    [J]. Drug Safety, 2008, 31 : 885 - 885
  • [7] Data Mining in Pharmacovigilance Practice: Which Algorithm to Use?
    Yang, X.
    Freeman, J.
    Bwire, R.
    [J]. DRUG SAFETY, 2008, 31 (10) : 888 - 888
  • [8] A methodology for predicting agent behavior by the use of data mining techniques
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    Mitkas, P
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    [J]. ARCHIVES OF ACOUSTICS, 2020, 45 (02) : 303 - 311
  • [10] Predicting assembly quality of complex structures using data mining - Predicting with decision tree algorithm
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