Circulating tumor DNA sequencing provides comprehensive mutation profiling for pediatric central nervous system tumors

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作者
Erin R. Bonner
Robin Harrington
Augustine Eze
Miriam Bornhorst
Cassie N. Kline
Heather Gordish-Dressman
Adam Dawood
Biswajit Das
Li Chen
Rini Pauly
P. Mickey Williams
Chris Karlovich
Amanda Peach
D’andra Howell
James Doroshow
Lindsay Kilburn
Roger J. Packer
Sabine Mueller
Javad Nazarian
机构
[1] Children’s National Hospital,Center for Genetic Medicine Research
[2] The George Washington University School of Medicine and Health Sciences,Institute for Biomedical Sciences
[3] Frederick National Laboratory for Cancer Research,Molecular Characterization Laboratory
[4] University of Pennsylvania Perelman School of Medicine,Division of Oncology, Department of Pediatrics, Children’s Hospital of Philadelphia
[5] Children’s National Hospital,Department of Biostatistics
[6] National Cancer Institute,Division of Cancer Treatment and Diagnosis, Developmental Therapeutics Clinic/Early Clinical Trials Development Program
[7] Children’s National Hospital,Brain Tumor Institute
[8] University of California San Francisco,Department of Neurology, Neurosurgery and Pediatrics
[9] University Children’s Hospital Zürich,Department of Pediatrics
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摘要
Molecular profiling of childhood CNS tumors is critical for diagnosis and clinical management, yet tissue access is restricted due to the sensitive tumor location. We developed a targeted deep sequencing platform to detect tumor driver mutations, copy number variations, and heterogeneity in the liquid biome. Here, we present the sensitivity, specificity, and clinical relevance of our minimally invasive platform for tumor mutation profiling in children diagnosed with CNS cancer.
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