Molecular confirmation of the genomic constitution of Douglasdeweya (Triticeae: Poaceae): demonstration of the utility of the 5S rDNA sequence as a tool for haplome identification

被引:0
|
作者
Bernard R. Baum
Douglas A. Johnson
机构
[1] Agriculture and Agri-Food Canada,Ottawa
[2] Eastern Cereal and Oilseed Research Center,Carleton Institute of Biology
[3] University of Ottawa,undefined
来源
关键词
Genome constitution; Haplome; Non-transcribed spacer; Unit class;
D O I
暂无
中图分类号
学科分类号
摘要
A new genus Douglasdeweya containing the two species, Douglasdeweya deweyi and D. wangii was published in 2005 by Yen et al. based upon the results of cytogenetical and morphological findings. The genome constitution of Douglasdeweya—PPStSt—allowed its segregation from the genus Pseudoroegneria which contains the StSt or StStStSt genomes. Our previous work had demonstrated the utility of using 5S rDNA units, especially the non-transcribed spacer sequence variation, for the resolution of genomes (haplomes) previously established by cytology. Here, we show that sequence analysis of the 5S DNA units from these species strongly supports the proposed species relationships of Yen et al. (Can J Bot 83:413–419, 2005), i.e., the PP genome from Agropyron and the StSt genome from Pseudoroegneria. Analysis of the 5S rDNA units constitutes a powerful tool for genomic research especially in the Triticeae.
引用
收藏
相关论文
共 26 条
  • [1] Molecular confirmation of the genomic constitution of Douglasdeweya (Triticeae: Poaceae):: demonstration of the utility of the 5S rDNA sequence as a tool for haplome identification
    Baum, Bernard R.
    Johnson, Douglas A.
    MOLECULAR GENETICS AND GENOMICS, 2008, 279 (06) : 621 - 628
  • [2] Molecular diversity of the 5S rDNA units in the Elymus dahuricus complex (Poaceae: Triticeae) supports the genomic constitution of St, Y, and H haplomes
    Baum, BR
    Bailey, LG
    Johnson, DA
    Agafonov, AV
    CANADIAN JOURNAL OF BOTANY-REVUE CANADIENNE DE BOTANIQUE, 2003, 81 (11): : 1091 - 1103
  • [3] The 5S rDNA units in Kengyilia (Poaceae: Triticeae):: diversity of the nontranscribed spacer and genomic relationships
    Baum, BR
    Bailey, LG
    CANADIAN JOURNAL OF BOTANY-REVUE CANADIENNE DE BOTANIQUE, 2000, 78 (12): : 1571 - 1579
  • [4] Codependence of repetitive sequence classes in genomes: phylogenetic analysis of 5S rDNA families in Hordeum (Triticeae: Poaceae)
    Baum, Bernard R.
    Edwards, Tara
    Johnson, Douglas A.
    GENOME, 2010, 53 (03) : 180 - 202
  • [5] Molecular diversity of the 5S nuclear ribosomal DNA in Campeiostachys with StHY haplome constitution
    Yang, Cai-Rong
    Baum, Bernard R.
    Johnson, Douglas A.
    Zhang, Hai-Qin
    Zhou, Yong-Hong
    JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 58 (01) : 69 - 76
  • [6] Analysis of 5S rDNA units-in the Triticeae: the potential to assign sequence units to haplomes
    Baum, BR
    Johnson, DA
    Bailey, LG
    TRITICEAE III, 1998, : 85 - 96
  • [7] The 5S rRNA gene sequence variation in wheats and some polyploid wheat progenitors (Poaceae: Triticeae)
    Baum, BR
    Bailey, LG
    GENETIC RESOURCES AND CROP EVOLUTION, 2001, 48 (01) : 35 - 51
  • [8] The 5S rRNA gene sequence variation in wheats and some polyploid wheat progenitors (Poaceae: Triticeae)
    Bernard R. Baum
    L. Grant Bailey
    Genetic Resources and Crop Evolution, 2001, 48 : 35 - 51
  • [9] The molecular diversity of the 5S rRNA gene in Kengyilia alatavica (Drobov) J.L. Yang, Yen & Baum (Poaceae: Triticeae): Potential genomic assignment of different rDNA units
    Baum, BR
    Bailey, LG
    GENOME, 1997, 40 (02) : 215 - 228
  • [10] The 5S rRNA gene in wall barley (Hordeum murinum L. sensu lato):: Sequence variation among repeat units and relationship to the Y haplome in the genus Hordeum (Poaceae: Triticeae)
    Baum, BR
    Johnson, DA
    GENOME, 1999, 42 (05) : 854 - 866