Twiner: correlation-based regularization for identifying common cancer gene signatures

被引:0
|
作者
Marta B. Lopes
Sandra Casimiro
Susana Vinga
机构
[1] Instituto de Telecomunicações,
[2] Instituto Superior Técnico,undefined
[3] Universidade de Lisboa,undefined
[4] INESC-ID,undefined
[5] Instituto Superior Técnico,undefined
[6] Universidade de Lisboa,undefined
[7] Luis Costa Lab,undefined
[8] Instituto de Medicina Molecular,undefined
[9] Faculdade de Medicina da Universidade de Lisboa,undefined
[10] IDMEC,undefined
[11] Instituto Superior Técnico,undefined
[12] Universidade de Lisboa,undefined
来源
关键词
Gene network; Sparse logistic regression; Breast invasive carcinoma; Triple-negative breast cancer; Prostate adenocarcinoma;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Twiner: correlation-based regularization for identifying common cancer gene signatures
    Lopes, Marta B.
    Casimiro, Sandra
    Vinga, Susana
    [J]. BMC BIOINFORMATICS, 2019, 20 (1)
  • [2] TCox: Correlation-Based Regularization Applied to Colorectal Cancer Survival Data
    Peixoto, Carolina
    Lopes, Marta B.
    Martins, Marta
    Costa, Luis
    Vinga, Susana
    [J]. BIOMEDICINES, 2020, 8 (11) : 1 - 16
  • [3] An ensemble correlation-based gene selection algorithm for cancer classification with gene expression data
    Piao, Yongjun
    Piao, Minghao
    Park, Kiejung
    Ryu, Keun Ho
    [J]. BIOINFORMATICS, 2012, 28 (24) : 3306 - 3315
  • [4] Identifying Gene Signatures for Cancer Drug Repositioning Based on Sample Clustering
    Wang, Fei
    Ding, Yulian
    Lei, Xiujuan
    Liao, Bo
    Wu, Fangxiang
    [J]. IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2022, 19 (02) : 953 - 965
  • [5] CORRELATION-BASED COMPARISON OF ANALOG SIGNATURES FOR IDENTIFICATION AND FAULT-DIAGNOSIS
    PAPAKOSTAS, DK
    HATZOPOULOS, AA
    [J]. IEEE TRANSACTIONS ON INSTRUMENTATION AND MEASUREMENT, 1993, 42 (04) : 860 - 863
  • [6] Correlation-based Regularization for Fast and Energy-Efficient Spiking Neural Networks
    Han, Chan Sik
    Lee, Keon Myung
    [J]. 37TH ANNUAL ACM SYMPOSIUM ON APPLIED COMPUTING, 2022, : 1048 - 1055
  • [7] Gene signatures identifying nodal positive breast cancer
    不详
    [J]. PATHOLOGY RESEARCH AND PRACTICE, 2005, 201 (03) : 221 - 221
  • [8] Identification of Common Gene Signatures in Microarray and RNA-Sequencing Data Using Network-Based Regularization
    Diegues, Ines
    Vinga, Susana
    Lopes, Marta B.
    [J]. BIOINFORMATICS AND BIOMEDICAL ENGINEERING (IWBBIO 2020), 2020, 12108 : 15 - 26
  • [9] On triangle inequalities of correlation-based distances for gene expression profiles
    Chen, Jiaxing
    Ng, Yen Kaow
    Lin, Lu
    Zhang, Xianglilan
    Li, Shuaicheng
    [J]. BMC BIOINFORMATICS, 2023, 24 (01)
  • [10] Biclustering of Gene Expression Data by Correlation-Based Scatter Search
    Juan A Nepomuceno
    Alicia Troncoso
    Jesús S Aguilar-Ruiz
    [J]. BioData Mining, 4