The Michaelis-Menten Reaction at Low Substrate Concentrations: Pseudo-First-Order Kinetics and Conditions for Timescale Separation

被引:0
|
作者
Eilertsen, Justin [1 ]
Schnell, Santiago [2 ,3 ]
Walcher, Sebastian [4 ]
机构
[1] Amer Math Soc, Math Reviews, 416 4th St, Ann Arbor, MI 48103 USA
[2] Univ Notre Dame, Dept Biol Sci, Notre Dame, IN 46556 USA
[3] Univ Notre Dame, Dept Appl & Computat Math & Stat, Notre Dame, IN 46556 USA
[4] Rhein Westfal TH Aachen, Math A, D-52056 Aachen, Germany
关键词
Comparison principle; Pseudo-first-order kinetics; Total quasi-steady state approximation; Monotone dynamical system; PARAMETER-ESTIMATION; DIFFERENTIAL-EQUATIONS; SYSTEMS;
D O I
10.1007/s11538-024-01295-z
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
We demonstrate that the Michaelis-Menten reaction mechanism can be accurately approximated by a linear system when the initial substrate concentration is low. This leads to pseudo-first-order kinetics, simplifying mathematical calculations and experimental analysis. Our proof utilizes a monotonicity property of the system and Kamke's comparison theorem. This linear approximation yields a closed-form solution, enabling accurate modeling and estimation of reaction rate constants even without timescale separation. Building on prior work, we establish that the sufficient condition for the validity of this approximation is s 0 << K \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$s_0 \ll K$$\end{document} , where K = k 2 / k 1 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$K=k_2/k_1$$\end{document} is the Van Slyke-Cullen constant. This condition is independent of the initial enzyme concentration. Further, we investigate timescale separation within the linear system, identifying necessary and sufficient conditions and deriving the corresponding reduced one-dimensional equations.
引用
收藏
页数:13
相关论文
共 13 条