Expression signature and prognostic value of CREC gene family in human colorectal cancer

被引:0
|
作者
Junya Ning
Min Liu
Jing Shen
Deping Wang
Lijuan Gao
Huiyu Li
Jimin Cao
机构
[1] Shanxi Medical University,Key Laboratory of Cellular Physiology at Shanxi Medical University, Ministry of Education, and the Department of Physiology
[2] Shanxi Academy of Medical Sciences,Department of General Surgery, Shanxi Bethune Hospital
[3] Tongji Shanxi Hospital,Tongji Hospital, Tongji Medical College
[4] Third Hospital of Shanxi Medical University,undefined
[5] Huazhong University of Science and Technology,undefined
来源
BMC Cancer | / 23卷
关键词
CREC family; Expression signature; Colorectal cancer; Prognosis; Bioinformatics;
D O I
暂无
中图分类号
学科分类号
摘要
Colorectal cancer (CRC) is one of the malignant tumors with the highest morbidity and mortality and poor prognosis. The mammalian gene family of Cab45/reticulocalbin/ERC-45/calumenin (CREC) consists of RCN1, RCN2, RCN3, SDF4 and CALU. Although CREC family members have been associated with CRC, the expression pattern, prognostic value, and the role of CREC family in CRC remain unclear. In this study, the expression, survival and biological functions of CREC family in CRC were determined via bioinformatic datasets analysis and experimental verification on clinical CRC specimen. Bioinformatic analysis showed that the expression levels of most CREC family genes were higher in CRC tissues than in normal colorectal tissues. The qPCR and western blot results also revealed that the transcriptional and protein levels of CREC family were elevated in CRC tissues compared with adjacent tissues. Besides, CREC family was significantly correlated with advanced tumor stage and poor prognosis of CRC patients. The expression levels of CREC family had correlations with genomic mutation and methylation, and with the infiltration levels of CD4 + T cells, macrophages, neutrophils, and dendritic cells in the microenvironment of CRC. Functional networks enrichment analysis indicated that the genes of CREC family were essential factors for CRC metastasis. Collectively, these findings suggest that CREC family might be potential targets for the treatment of CRC and candidate prognostic markers for CRC patients.
引用
收藏
相关论文
共 50 条
  • [1] Expression signature and prognostic value of CREC gene family in human colorectal cancer
    Ning, Junya
    Liu, Min
    Shen, Jing
    Wang, Deping
    Gao, Lijuan
    Li, Huiyu
    Cao, Jimin
    [J]. BMC CANCER, 2023, 23 (01)
  • [2] Expression and potential prognostic value of histone family gene signature in breast cancer
    Xie, Wenting
    Zhang, Jiajia
    Zhong, Peng
    Qin, Shanshan
    Zhang, Han
    Fan, Xin
    Yin, Yuzhen
    Liang, Ruipeng
    Han, Yali
    Liao, Yina
    Yu, Xiaqing
    Long, Huideng
    Lv, Zhongwei
    Ma, Chao
    Yu, Fei
    [J]. EXPERIMENTAL AND THERAPEUTIC MEDICINE, 2019, 18 (06) : 4893 - 4903
  • [3] Identification of a five-gene signature with prognostic value in colorectal cancer
    Sun, Guangwei
    Li, Yalun
    Peng, Yangjie
    Lu, Dapeng
    Zhang, Fuqiang
    Cui, Xueyang
    Zhang, Qingyue
    Li, Zhuang
    [J]. JOURNAL OF CELLULAR PHYSIOLOGY, 2019, 234 (04) : 3829 - 3836
  • [4] A metabolism-associated gene signature with prognostic value in colorectal cancer
    Lingyan Xiao
    Yongbiao Huang
    Wan Qin
    Chaofan Liu
    Hong Qiu
    Bo Liu
    Xianglin Yuan
    [J]. Oncology and Translational Medicine, 2022, (01) : 43 - 54
  • [5] Identification of a five-gene signature of the RGS gene family with prognostic value in ovarian cancer
    Hu, Yuexin
    Zheng, Mingjun
    Wang, Shuang
    Gao, Lingling
    Gou, Rui
    Liu, Ouxuan
    Dong, Hui
    Li, Xiao
    Lin, Bei
    [J]. GENOMICS, 2021, 113 (04) : 2134 - 2144
  • [6] Gene expression profiling-derived immunohistochemistry signature with high prognostic value in colorectal carcinoma
    Chang, Wenjun
    Gao, Xianhua
    Han, Yifang
    Du, Yan
    Liu, Qizhi
    Wang, Lei
    Tan, Xiaojie
    Zhang, Qi
    Liu, Yan
    Zhu, Yan
    Yu, Yongwei
    Fan, Xinjuan
    Zhang, Hongwei
    Zhou, Weiping
    Wang, Jianping
    Fu, Chuangang
    Cao, Guangwen
    [J]. GUT, 2014, 63 (09) : 1457 - 1467
  • [7] Prognostic gene expression signature associated with two molecularly distinct subtypes of colorectal cancer
    Oh, Sang Cheul
    Park, Yun-Yong
    Park, Eun Sung
    Lim, Jae Yun
    Kim, Soo Mi
    Kim, Sang-Bae
    Kim, Jongseung
    Kim, Sang Cheol
    Chu, In-Sun
    Smith, J. Joshua
    Beauchamp, R. Daniel
    Yeatman, Timothy J.
    Kopetz, Scott
    Lee, Ju-Seog
    [J]. GUT, 2012, 61 (09) : 1291 - 1298
  • [8] Prognostic-gene Expression Signature of Carcinoma-associated Fibroblasts in Colorectal Cancer
    Berdiel Acer, M.
    [J]. EUROPEAN JOURNAL OF CANCER, 2012, 48 : S88 - S88
  • [9] MicroRNA expression analysis of advanced colorectal cancer reveals a microRNA signature with prognostic and predictive value
    Zeng, Zhaolei
    Lu, Jiahua
    Zuo, Zhixiang
    Zhao, Qi
    Xu, Ruihua
    [J]. CANCER RESEARCH, 2018, 78 (13)
  • [10] MICRORNA EXPRESSION ANALYSIS OF ADVANCED COLORECTAL CANCER REVEALS A MICRORNA SIGNATURE WITH PROGNOSTIC AND PREDICTIVE VALUE
    Zeng, Zhaolei
    Lu, Jiahuan
    Zuo, Zhixiang
    Xu, Ruihua
    [J]. GUT, 2018, 67 : A6 - A6