Sequence analysis of a feline- and porcine-origin G3P[9] rotavirus A strain in a child with acute gastroenteritis in Japan

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作者：
Yuya Fukuda
Kaoru Araki
Megumi Hara
Yuji Yamashita
Shuhei Adachi
Saho Honjo
Atsuo Togashi
Satoshi Hirakawa
Shinobu Fukumura
Masaki Yamamoto
Takeshi Tsugawa
机构：
[1] Japan Red Cross Urakawa Hospital,Department of Pediatrics
[2] Sapporo Medical University School of Medicine,Department of Pediatrics
[3] Saga University,Health Care Center
[4] Saga University,Department of Preventive Medicine
[5] Yamashita Children’s Clinic,undefined
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Archives of Virology | 2023年 / 168卷
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摘要：
We isolated the rare G3P[9] rotavirus strain RVA/Human-wt/JPN/R11-035/2015/G3P[9] from a 2-year-old girl presenting with vomiting and diarrhea who had daily contact with cats in Japan, 2015. Full-genome analysis revealed that the R11-035 strain had an AU-1-like genetic constellation, except for the NSP3 (T) gene: G3-P[9]-I3-R3-C3-M3-A3-N3-T1-E3-H6. Phylogenetic analysis showed that strain R11-035 is closely related to human/feline-like human strains, and only the NSP3 (T1) gene was clustered together with Taiwanese porcine strains. We postulate that the R11-035 strain was directly transmitted from a cat to the patient and acquired its NSP3 gene through intergenotype reassortment with porcine strains before being transmitted to humans.
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