Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity

被引:0
|
作者
Abulikemu Tajiguli
Mingchu Xu
Qing Fu
Rouzimaimaiti Yiming
Keqing Wang
Yumei Li
Aiden Eblimit
Ruifang Sui
Rui Chen
Haji Akber Aisa
机构
[1] The Key Laboratory of Plant Resources and Chemistry of Arid Zone,Department of Molecular and Human Genetics
[2] Xinjiang Technical Institute of Physics and Chemistry,Department of Ophthalmology
[3] Chinese Academy of Sciences,Department of Ophthalmology
[4] Baylor College of Medicine,Department of Ophthalmology
[5] Human Genome Sequencing Center,undefined
[6] Baylor College of Medicine,undefined
[7] North Huashan Hospital,undefined
[8] Fudan University,undefined
[9] Minguang Ophthalmic Hospital,undefined
[10] Peking Union Medical College Hospital,undefined
[11] Peking Union Medical College,undefined
[12] Chinese Academy of Medical Sciences,undefined
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Inherited retinal disease (IRD) is a category of genetic disorders affecting retina. Understanding the molecular basis of IRD is vital for clinical and genetic classification of patients. Uyghur people is an isolated ethnic group mainly residing in northwestern China with genetic admixture from Europeans and East Asians. The genetic etiology of IRD in this specific population still remains unknown. Here, by next-generation sequencing (NGS), we screened mutations in over 200 known retinal disease genes in a cohort of 12 unrelated Uyghur IRD probands. Out of the 12 probands, six are solved with high confidence, two with low confidence, while the remaining four are unsolved. We identified known disease-causing alleles in this cohort that suggest ancient Uyghur migration and also discovered eight novel disease-associated variants. Our results showed NGS-based mutation screening as a reliable approach for molecular diagnosis. In addition, this approach can also be applied to reveal the genetic history of a specific ethnic group.
引用
收藏
相关论文
共 50 条
  • [1] Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity
    Tajiguli, Abulikemu
    Xu, Mingchu
    Fu, Qing
    Yiming, Rouzimaimaiti
    Wang, Keqing
    Li, Yumei
    Eblimit, Aiden
    Sui, Ruifang
    Chen, Rui
    Aisa, Haji Akber
    [J]. SCIENTIFIC REPORTS, 2016, 6
  • [2] Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
    Qi Zhang
    Mingchu Xu
    Jennifer D. Verriotto
    Yumei Li
    Hui Wang
    Lin Gan
    Byron L. Lam
    Rui Chen
    [J]. Scientific Reports, 6
  • [3] Next-generation sequencing-based molecular diagnosis of 35 Hispanic retinitis pigmentosa probands
    Zhang, Qi
    Xu, Mingchu
    Verriotto, Jennifer D.
    Li, Yumei
    Wang, Hui
    Gan, Lin
    Lam, Byron L.
    Chen, Rui
    [J]. SCIENTIFIC REPORTS, 2016, 6
  • [4] Next-Generation Sequencing-Based Molecular Diagnosis of Choroideremia
    Shimizu, Kayo
    Oishi, Akio
    Oishi, Maho
    Ogino, Ken
    Morooka, Satoshi
    Sugahara, Masako
    Gotoh, Norimoto
    Yoshimura, Nagahisa
    [J]. CASE REPORTS IN OPHTHALMOLOGY, 2015, 6 (02): : 246 - 250
  • [5] Next-generation sequencing-based molecular diagnosis of 82 retinitis pigmentosa probands from Northern Ireland
    Zhao, Li
    Wang, Feng
    Wang, Hui
    Li, Yumei
    Alexander, Sharon
    Wang, Keqing
    Willoughby, Colin E.
    Zaneveld, Jacques E.
    Jiang, Lichun
    Soens, Zachry T.
    Earle, Philip
    Simpson, David
    Silvestri, Giuliana
    Chen, Rui
    [J]. HUMAN GENETICS, 2015, 134 (02) : 217 - 230
  • [6] Next-generation sequencing-based molecular diagnosis of 82 retinitis pigmentosa probands from Northern Ireland
    Li Zhao
    Feng Wang
    Hui Wang
    Yumei Li
    Sharon Alexander
    Keqing Wang
    Colin E. Willoughby
    Jacques E. Zaneveld
    Lichun Jiang
    Zachry T. Soens
    Philip Earle
    David Simpson
    Giuliana Silvestri
    Rui Chen
    [J]. Human Genetics, 2015, 134 : 217 - 230
  • [7] Next generation sequencing-based comprehensive molecular diagnosis of retinitis pigmentosa probands in Miami
    Verriotto, Jennifer
    Zhang, Qi
    Xu, Mingchu
    Li, Yumei
    Wang, Hui
    Gan, Lin
    Chen, Rui
    Lam, Byron L.
    [J]. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2016, 57 (12)
  • [8] Next-generation sequencing-based molecular diagnosis of neonatal hypotonia in Chinese Population
    Yan Wang
    Wei Peng
    Hong-Yan Guo
    Hui Li
    Jie Tian
    Yu-Jing Shi
    Xiao Yang
    Yao Yang
    Wan-Qiao Zhang
    Xin Liu
    Guan-Nan Liu
    Tao Deng
    Yi-Min Sun
    Wan-li Xing
    Jing Cheng
    Zhi-Chun Feng
    [J]. Scientific Reports, 6
  • [9] Next-generation sequencing-based molecular diagnosis of neonatal hypotonia in Chinese Population
    Wang, Yan
    Peng, Wei
    Guo, Hong-Yan
    Li, Hui
    Tian, Jie
    Shi, Yu-Jing
    Yang, Xiao
    Yang, Yao
    Zhang, Wan-Qiao
    Liu, Xin
    Liu, Guan-Nan
    Deng, Tao
    Sun, Yi-Min
    Xing, Wan-li
    Cheng, Jing
    Feng, Zhi-Chun
    [J]. SCIENTIFIC REPORTS, 2016, 6
  • [10] EVALUATION OF THE UTILITY OF USING NEXT-GENERATION SEQUENCING PANELS IN GENETIC DIAGNOSIS OF INHERITED RETINAL DISEASE
    DeRoach, John
    McLaren, Terri
    Montgomery, Hannah
    Thompson, Jennifer
    Kap, Caitlyn
    Hoffmann, Ling
    Lamey, Tina
    [J]. CLINICAL AND EXPERIMENTAL OPHTHALMOLOGY, 2015, 43 : 52 - 52