Targeted single-cell genomics reveals novel host adaptation strategies of the symbiotic bacteria Endozoicomonas in Acropora tenuis coral

被引:0
|
作者
Keigo Ide
Yohei Nishikawa
Toru Maruyama
Yuko Tsukada
Masato Kogawa
Hiroki Takeda
Haruka Ito
Ryota Wagatsuma
Rimi Miyaoka
Yoshikatsu Nakano
Koji Kinjo
Michihiro Ito
Masahito Hosokawa
Kei Yura
Shoichiro Suda
Haruko Takeyama
机构
[1] Waseda University,Department of Life Science and Medical Bioscience
[2] National Institute of Advanced Industrial Science and Technology,Computational Bio Big
[3] Waseda University,Data Open Innovation Laboratory (CBBD
[4] University of the Ryukyus,OIL)
[5] Okinawa Institute of Science and Technology Graduate University,Research Organization for Nano and Life Innovation
[6] Umino-Tane Co.,Tropical Biosphere Research Center
[7] Ltd.,Marine Science Section, Research Support Division
[8] Waseda Research Institute for Science and Engineering,Institute for Advanced Research of Biosystem Dynamics
[9] Ochanomizu University,Graduate School of Humanities and Sciences
[10] University of the Ryukyus,Faculty of Science
来源
Microbiome | / 10卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 14 条
  • [1] Targeted single-cell genomics reveals novel host adaptation strategies of the symbiotic bacteria Endozoicomonas in Acropora tenuis coral
    Ide, Keigo
    Nishikawa, Yohei
    Maruyama, Toru
    Tsukada, Yuko
    Kogawa, Masato
    Takeda, Hiroki
    Ito, Haruka
    Wagatsuma, Ryota
    Miyaoka, Rimi
    Nakano, Yoshikatsu
    Kinjo, Koji
    Ito, Michihiro
    Hosokawa, Masahito
    Yura, Kei
    Suda, Shoichiro
    Takeyama, Haruko
    MICROBIOME, 2022, 10 (01)
  • [2] Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea
    Song, Yizhi
    Kaster, Anne-Kristin
    Vollmers, John
    Song, Yanqing
    Davison, Paul A.
    Frentrup, Martinique
    Preston, Gail M.
    Thompson, Ian P.
    Murrell, J. Colin
    Yin, Huabing
    Hunter, C. Neil
    Huang, Wei E.
    MICROBIAL BIOTECHNOLOGY, 2017, 10 (01): : 125 - 137
  • [3] Multiplex single-cell chemical genomics reveals the kinase dependence of the response to targeted therapy
    McFaline-Figueroa, Jose L.
    Srivatsan, Sanjay
    Hill, Andrew J.
    Gasperini, Molly
    Jackson, Dana L.
    Saunders, Lauren
    Domcke, Silvia
    Regalado, Samuel G.
    Lazarchuck, Paul
    Alvarez, Sarai
    Monnat Jr, Raymond J.
    Shendure, Jay
    Trapnell, Cole
    CELL GENOMICS, 2024, 4 (02):
  • [4] Single-cell genomics reveals metabolic strategies for microbial growth and survival in an oligotrophic aquifer
    Wilkins, Michael J.
    Kennedy, David W.
    Castelle, Cindy J.
    Field, Erin K.
    Stepanauskas, Ramunas
    Fredrickson, James K.
    Konopka, Allan E.
    MICROBIOLOGY-SGM, 2014, 160 : 362 - 372
  • [5] Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota
    Chijiiwa, Rieka
    Hosokawa, Masahito
    Kogawa, Masato
    Nishikawa, Yohei
    Ide, Keigo
    Sakanashi, Chikako
    Takahashi, Kai
    Takeyama, Haruko
    MICROBIOME, 2020, 8 (01)
  • [6] Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota
    Rieka Chijiiwa
    Masahito Hosokawa
    Masato Kogawa
    Yohei Nishikawa
    Keigo Ide
    Chikako Sakanashi
    Kai Takahashi
    Haruko Takeyama
    Microbiome, 8
  • [7] Single-cell genomics of uncultivated deep-branching magnetotactic bacteria reveals a conserved set of magnetosome genes
    Kolinko, Sebastian
    Richter, Michael
    Gloeckner, Frank-Oliver
    Brachmann, Andreas
    Schueler, Dirk
    ENVIRONMENTAL MICROBIOLOGY, 2016, 18 (01) : 21 - 37
  • [8] scMAR-Seq: a novel workflow for targeted single-cell genomics of microorganisms using radioactive labeling
    Lo, Hao-Yu
    Wink, Konstantin
    Nitz, Henrike
    Kaestner, Matthias
    Belder, Detlev
    Mueller, Jochen A.
    Kaster, Anne-Kristin
    MSYSTEMS, 2023, 8 (06)
  • [9] Single-cell amplicon sequencing reveals community structures and transmission trends of protist-associated bacteria in a termite host
    Stephens, Michael E.
    Gage, Daniel J.
    PLOS ONE, 2020, 15 (05):
  • [10] Single-Cell Genomics Reveals a Novel Cell State During Smooth Muscle Cell Phenotypic Switching and Potential Therapeutic Targets for Atherosclerosis in Mouse and Human
    Pan, Huize
    Xue, Chenyi
    Auerbach, Benjamin J.
    Fan, Jiaxin
    Bashore, Alexander C.
    Cui, Jian
    Yang, Dina Y.
    Trignano, Sarah B.
    Liu, Wen
    Shi, Jianting
    Ihuegbu, Chinyere O.
    Bush, Erin C.
    Worley, Jeremy
    Vlahos, Lukas
    Laise, Pasquale
    Solomon, Robert A.
    Connolly, Edward S.
    Califano, Andrea
    Sims, Peter A.
    Zhang, Hanrui
    Li, Mingyao
    Reilly, Muredach P.
    CIRCULATION, 2020, 142 (21) : 2060 - 2075